RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 LGALS9O00182 355 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 SCAF4O95104 1147 aaKnown RBP13.41□□□□□ -0.26
CLN6-212ENST00000636020 GLAP06280 429 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 CTRB1P17538 263 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 SOX2P48431 317 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 AQP4P55087 323 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 RHOGP84095 191 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 DDI2Q5TDH0 399 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 CTRB2Q6GPI1 263 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 IZUMO2Q6UXV1 221 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 KIR2DL5AQ8N109 375 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 STPG3Q8N7X2 389 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 KIR2DL5BQ8NHK3 375 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 C11orf45Q8TAV5 145 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 STEAP1Q9UHE8 339 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 FBXL7Q9UJT9 491 aa13.41□□□□□ -0.26
CLN6-212ENST00000636020 FAM223BA6NKX1 122 aa13.4□□□□□ -0.26
CLN6-212ENST00000636020 PROP1O75360 226 aa13.4□□□□□ -0.26
CLN6-212ENST00000636020 ALPLP05186 524 aa13.4□□□□□ -0.26
CLN6-212ENST00000636020 CRYGBP07316 175 aa13.4□□□□□ -0.26
CLN6-212ENST00000636020 ATP5G2Q06055 141 aa13.4□□□□□ -0.26
CLN6-212ENST00000636020 HMGN3Q15651 99 aa13.4□□□□□ -0.26
CLN6-212ENST00000636020 KDM4DQ6B0I6 523 aa13.4□□□□□ -0.26
CLN6-212ENST00000636020 FAM223AQ8IWN6 122 aa13.4□□□□□ -0.26
CLN6-212ENST00000636020 ACBD7Q8N6N7 88 aa13.4□□□□□ -0.26
CLN6-212ENST00000636020 DRAXINQ8NBI3 349 aaPredicted RBP13.4□□□□□ -0.26
CLN6-212ENST00000636020 AGMATQ9BSE5 352 aa13.4□□□□□ -0.26
CLN6-212ENST00000636020 VCXQ9H320 206 aa13.4□□□□□ -0.26
CLN6-212ENST00000636020 E9PI62 339 aa13.39□□□□□ -0.27
CLN6-212ENST00000636020 IGLV2-23P01705 113 aa13.39□□□□□ -0.27
CLN6-212ENST00000636020 HLA-AP01891 365 aaKnown RBP13.39□□□□□ -0.27
CLN6-212ENST00000636020 OR9G9P0C7N8 305 aa13.39□□□□□ -0.27
CLN6-212ENST00000636020 APELAP0DMC3 54 aa13.39□□□□□ -0.27
CLN6-212ENST00000636020 FUT3P21217 361 aa13.39□□□□□ -0.27
CLN6-212ENST00000636020 POLR2IP36954 125 aaKnown RBP13.39□□□□□ -0.27
CLN6-212ENST00000636020 LINC00205P59089 165 aa13.39□□□□□ -0.27
CLN6-212ENST00000636020 GPR176Q14439 515 aa13.39□□□□□ -0.27
CLN6-212ENST00000636020 SIGIRRQ6IA17 410 aa13.39□□□□□ -0.27
CLN6-212ENST00000636020 ZNF575Q86XF7 245 aa13.39□□□□□ -0.27
CLN6-212ENST00000636020 FBLIM1Q8WUP2 373 aa13.39□□□□□ -0.27
CLN6-212ENST00000636020 OR14A2Q96R54 314 aa13.39□□□□□ -0.27
CLN6-212ENST00000636020 ZNF184Q99676 751 aaPredicted RBP13.39□□□□□ -0.27
CLN6-212ENST00000636020 ISG20L2Q9H9L3 353 aaKnown RBP13.39□□□□□ -0.27
CLN6-212ENST00000636020 TRBV9A0A0B4J1U6 114 aa13.38□□□□□ -0.27
CLN6-212ENST00000636020 IGLL5B9A064 214 aa13.38□□□□□ -0.27
CLN6-212ENST00000636020 PPP5D1E7EU14 171 aa13.38□□□□□ -0.27
CLN6-212ENST00000636020 TUSC2O75896 110 aa13.38□□□□□ -0.27
CLN6-212ENST00000636020 OR2C1O95371 312 aa13.38□□□□□ -0.27
CLN6-212ENST00000636020 BDKRB2P30411 391 aa13.38□□□□□ -0.27
CLN6-212ENST00000636020 PDPNQ86YL7 162 aa13.38□□□□□ -0.27
CLN6-212ENST00000636020 ZNF383Q8NA42 475 aa13.38□□□□□ -0.27
CLN6-212ENST00000636020 IL1F10Q8WWZ1 152 aa13.38□□□□□ -0.27
CLN6-212ENST00000636020 APOBP04114 4563 aaKnown RBP13.38□□□□□ -0.27
CLN6-212ENST00000636020 TMEM213A2RRL7 107 aa13.37□□□□□ -0.27
CLN6-212ENST00000636020 FAM90A7PA6NKC0 464 aa13.37□□□□□ -0.27
CLN6-212ENST00000636020 GGCTO75223 188 aaKnown RBP13.37□□□□□ -0.27
CLN6-212ENST00000636020 PRH1P02810 166 aa13.37□□□□□ -0.27
CLN6-212ENST00000636020 GPHB5Q86YW7 130 aa13.37□□□□□ -0.27
CLN6-212ENST00000636020 SYS1Q8N2H4 156 aa13.37□□□□□ -0.27
CLN6-212ENST00000636020 UXS1Q8NBZ7 420 aa13.37□□□□□ -0.27
CLN6-212ENST00000636020 TRAV25A0A0B4J276 109 aa13.36□□□□□ -0.27
CLN6-212ENST00000636020 ITGB1BP1O14713 200 aa13.36□□□□□ -0.27
CLN6-212ENST00000636020 CD2P06729 351 aa13.36□□□□□ -0.27
CLN6-212ENST00000636020 PPP3R1P63098 170 aa13.36□□□□□ -0.27
CLN6-212ENST00000636020 MRGPRG-AS1Q2M3A8 158 aa13.36□□□□□ -0.27
CLN6-212ENST00000636020 FAM209BQ5JX69 171 aa13.36□□□□□ -0.27
CLN6-212ENST00000636020 LHFPL3Q86UP9 236 aa13.36□□□□□ -0.27
CLN6-212ENST00000636020 OR1L6Q8NGR2 347 aa13.36□□□□□ -0.27
CLN6-212ENST00000636020 FAM46BQ96A09 425 aa13.36□□□□□ -0.27
CLN6-212ENST00000636020 MRPL48Q96GC5 212 aaKnown RBP13.36□□□□□ -0.27
CLN6-212ENST00000636020 PHB2Q99623 299 aa13.36□□□□□ -0.27
CLN6-212ENST00000636020 BANF2Q9H503 90 aa13.36□□□□□ -0.27
CLN6-212ENST00000636020 SMPD3Q9NY59 655 aaPredicted RBP13.36□□□□□ -0.27
CLN6-212ENST00000636020 ABRACLQ9P1F3 81 aa13.36□□□□□ -0.27
CLN6-212ENST00000636020 FCGR2BP31994 310 aaPredicted RBP13.35□□□□□ -0.27
CLN6-212ENST00000636020 CAPGP40121 348 aa13.35□□□□□ -0.27
CLN6-212ENST00000636020 MAP2K4P45985 399 aa13.35□□□□□ -0.27
CLN6-212ENST00000636020 HSPA13P48723 471 aa13.35□□□□□ -0.27
CLN6-212ENST00000636020 MFAP2P55001 183 aa13.35□□□□□ -0.27
CLN6-212ENST00000636020 SLC25A30Q5SVS4 291 aa13.35□□□□□ -0.27
CLN6-212ENST00000636020 BTNL8Q6UX41 500 aa13.35□□□□□ -0.27
CLN6-212ENST00000636020 OR2C3Q8N628 320 aa13.35□□□□□ -0.27
CLN6-212ENST00000636020 GPR148Q8TDV2 347 aa13.35□□□□□ -0.27
CLN6-212ENST00000636020 SELENOIQ9C0D9 397 aa13.35□□□□□ -0.27
CLN6-212ENST00000636020 C11orf68Q9H3H3 251 aaKnown RBP13.35□□□□□ -0.27
CLN6-212ENST00000636020 MAP6D1Q9H9H5 199 aa13.35□□□□□ -0.27
CLN6-212ENST00000636020 EXOGQ9Y2C4 368 aaKnown RBP13.35□□□□□ -0.27
CLN6-212ENST00000636020 APOA2P02652 100 aa13.34□□□□□ -0.27
CLN6-212ENST00000636020 MRPL28Q13084 256 aaKnown RBP13.34□□□□□ -0.27
CLN6-212ENST00000636020 GLIPR1L1Q6UWM5 242 aa13.34□□□□□ -0.27
CLN6-212ENST00000636020 NECAP1Q8NC96 275 aa13.34□□□□□ -0.27
CLN6-212ENST00000636020 ORAI1Q96D31 301 aa13.34□□□□□ -0.27
CLN6-212ENST00000636020 Q96M66 194 aa13.34□□□□□ -0.27
CLN6-212ENST00000636020 C11orf54Q9H0W9 315 aaPredicted RBP13.34□□□□□ -0.27
CLN6-212ENST00000636020 UBQLN2Q9UHD9 624 aa13.34□□□□□ -0.27
CLN6-212ENST00000636020 RAB26Q9ULW5 256 aa13.34□□□□□ -0.27
CLN6-212ENST00000636020 EXOSC1Q9Y3B2 195 aaKnown RBP13.34□□□□□ -0.27
CLN6-212ENST00000636020 A8MWP6 167 aa13.33□□□□□ -0.28
CLN6-212ENST00000636020 PDCD6O75340 191 aa13.33□□□□□ -0.28
CLN6-212ENST00000636020 MGMTP16455 207 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms