RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 SPIN2BQ9BPZ2 258 aa8.18□□□□□ -1.1
CACNA1A-216ENST00000635742 ARL6Q9H0F7 186 aa8.18□□□□□ -1.1
CACNA1A-216ENST00000635742 DEDDO75618 318 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 NXPH3O95157 252 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 PET100P0DJ07 73 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 IGHV1-8P0DP01 117 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 S100A11P31949 105 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 AKR1C2P52895 323 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 DLX1P56177 255 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 PRB3Q04118 309 aaPredicted RBP8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 Q6ZRM9 215 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 RNASE11Q8TAA1 199 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 C8orf46Q8TAG6 207 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 LSM10Q969L4 123 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 GAB2Q9UQC2 676 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 RCL1Q9Y2P8 373 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 SPTAN1Q13813 2472 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 PPIAL4CA0A0B4J2A2 164 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 RAB29O14966 203 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 PPIAL4GP0DN37 164 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 COX6B1P14854 86 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 G6PCP35575 357 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 SSTP61278 116 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 GNB2P62879 340 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 ZNF345Q14585 488 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 ODF1Q14990 250 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 KCNRGQ8N5I3 272 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 DDB2Q92466 427 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 RBMXL1Q96E39 390 aaKnown RBP8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 POMT1Q9Y6A1 747 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 AKAP6Q13023 2319 aa8.17□□□□□ -1.1
CACNA1A-216ENST00000635742 A0A087X0M5 115 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 A0A1B0GX30 115 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 FCGR3BO75015 233 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 PITX3O75364 302 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 OR2F2O95006 317 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 CFDP00746 253 aaPredicted RBP8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 NKX2-1P43699 371 aaPredicted RBP8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 OR2F1Q13607 317 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 SMCO1Q147U7 214 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 ESCO2Q56NI9 601 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 CXorf66Q5JRM2 361 aaPredicted RBP8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 SP5Q6BEB4 398 aaPredicted RBP8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 ACOT7LQ6ZUV0 252 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 TCTEX1D1Q8N7M0 179 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 ZNF383Q8NA42 475 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 LY6G5BQ8NDX9 201 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 DMBX1Q8NFW5 382 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 BPESC1Q9GZL8 116 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 MAGT1Q9H0U3 335 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 FAM212BQ9NTI7 297 aaPredicted RBP8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 CACNG5Q9UF02 275 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 SESN1Q9Y6P5 492 aa8.16□□□□□ -1.1
CACNA1A-216ENST00000635742 J3QR06 171 aa8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 ST8SIA3O43173 380 aa8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 KRASP01116 189 aa8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 P0C879 139 aa8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 SLC25A6P12236 298 aa8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 POLR2GP62487 172 aaKnown RBP eCLIP8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 INO80EQ8NBZ0 244 aaPredicted RBP8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 ZNF596Q8TC21 504 aa8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 NRGNQ92686 78 aa8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 RAB39BQ96DA2 213 aa8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 AQP10Q96PS8 301 aa8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 AIFM2Q9BRQ8 373 aa8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 SSBP3Q9BWW4 388 aaPredicted RBP8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 TMEM133Q9H2Q1 129 aa8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 C11orf1Q9H5F2 150 aa8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 MMP24Q9Y5R2 645 aa8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 ARHGAP32A7KAX9 2087 aa8.15□□□□□ -1.1
CACNA1A-216ENST00000635742 PIGBOS1A0A0B4J2F0 54 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 A0A0D9SG52 128 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 A0A1B0GU03 582 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 KIAA1324LA8MWY0 1029 aaPredicted RBP8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 BCL2L11O43521 198 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 SNAPC5O75971 98 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 IGHV2-5P01817 119 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 CT45A6P0DMU7 189 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 CT45A5P0DMU8 189 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 CT45A7P0DMV0 189 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 HKR1P10072 659 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 C4BPBP20851 252 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 THBS3P49746 956 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 WDR73Q6P4I2 378 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 TEX261Q6UWH6 196 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 ZNF833PQ6ZTB9 187 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 ZNF295-AS1Q8N0V1 137 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 LINC00311Q8N616 119 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 OR9G1Q8NH87 305 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 S1PR3Q99500 378 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 MRPL20Q9BYC9 149 aaKnown RBP8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 ONECUT1Q9UBC0 465 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 U3KQ87 197 aa8.15□□□□□ -1.11
CACNA1A-216ENST00000635742 IGHV2-26A0A0B4J1V2 119 aa8.14□□□□□ -1.11
CACNA1A-216ENST00000635742 E5RGE8 158 aa8.14□□□□□ -1.11
CACNA1A-216ENST00000635742 RBFOX2O43251 390 aaKnown RBP eCLIP8.14□□□□□ -1.11
CACNA1A-216ENST00000635742 TXNL1O43396 289 aa8.14□□□□□ -1.11
CACNA1A-216ENST00000635742 SSSCA1O60232 199 aa8.14□□□□□ -1.11
CACNA1A-216ENST00000635742 RLN2P04090 185 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms