RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 CITED1Q99966 193 aa7.73□□□□□ -1.17
LINC00339-210ENST00000635675 THAP7Q9BT49 309 aaPredicted RBP7.73□□□□□ -1.17
LINC00339-210ENST00000635675 WNT10AQ9GZT5 417 aa7.73□□□□□ -1.17
LINC00339-210ENST00000635675 IFT46Q9NQC8 304 aa7.73□□□□□ -1.17
LINC00339-210ENST00000635675 SDHAF2Q9NX18 166 aa7.73□□□□□ -1.17
LINC00339-210ENST00000635675 hCG_2014768A0A024R1R8 64 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 IGKV1D-13A0A0B4J2D9 117 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 NCBP2LA6PVI3 153 aaKnown RBP7.72□□□□□ -1.17
LINC00339-210ENST00000635675 M0R1X1 148 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 SULT1C2O00338 296 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 IGLV2-14P01704 120 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 OR5H8P0DN80 308 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 IGKV1-13P0DP09 117 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 SPNP16150 400 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 PTBP1P26599 531 aaKnown RBP eCLIP7.72□□□□□ -1.17
LINC00339-210ENST00000635675 FCGR2CP31995 323 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 LUMP51884 338 aaPredicted RBP7.72□□□□□ -1.17
LINC00339-210ENST00000635675 ACTBP60709 375 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 CDK10Q15131 360 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 TMEM95Q3KNT9 176 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 OVCH2Q7RTZ1 564 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 FAM71E2Q8N5Q1 922 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 WIPF2Q8TF74 440 aaPredicted RBP7.72□□□□□ -1.17
LINC00339-210ENST00000635675 FCAMRQ8WWV6 532 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 NECAP2Q9NVZ3 263 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 TBC1D24Q9ULP9 559 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 RBM7Q9Y580 266 aaKnown RBP7.72□□□□□ -1.17
LINC00339-210ENST00000635675 DNHD1Q96M86 4753 aa7.72□□□□□ -1.17
LINC00339-210ENST00000635675 VDAC2P45880 294 aaPredicted RBP7.71□□□□□ -1.17
LINC00339-210ENST00000635675 RFX2P48378 723 aa7.71□□□□□ -1.17
LINC00339-210ENST00000635675 DEFA1P59665 94 aa7.71□□□□□ -1.17
LINC00339-210ENST00000635675 DEFA3P59666 94 aa7.71□□□□□ -1.17
LINC00339-210ENST00000635675 RGS21Q2M5E4 152 aa7.71□□□□□ -1.17
LINC00339-210ENST00000635675 ZNF660Q6AZW8 331 aaPredicted RBP7.71□□□□□ -1.17
LINC00339-210ENST00000635675 DHRS11Q6UWP2 260 aa7.71□□□□□ -1.17
LINC00339-210ENST00000635675 KLHDC1Q8N7A1 406 aa7.71□□□□□ -1.17
LINC00339-210ENST00000635675 NPBQ8NG41 125 aa7.71□□□□□ -1.17
LINC00339-210ENST00000635675 C15orf40Q8WUR7 153 aa7.71□□□□□ -1.17
LINC00339-210ENST00000635675 SMIM4Q8WVI0 70 aa7.71□□□□□ -1.17
LINC00339-210ENST00000635675 GIMAP1Q8WWP7 306 aa7.71□□□□□ -1.17
LINC00339-210ENST00000635675 TRIM63Q969Q1 353 aa7.71□□□□□ -1.17
LINC00339-210ENST00000635675 PALMDQ9NP74 551 aa7.71□□□□□ -1.17
LINC00339-210ENST00000635675 LIN7CQ9NUP9 197 aaKnown RBP7.71□□□□□ -1.17
LINC00339-210ENST00000635675 WASHC3Q9Y3C0 194 aa7.71□□□□□ -1.17
LINC00339-210ENST00000635675 GABARAPH6UMI1 98 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 H7C2Y5 167 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 CTDSPLO15194 276 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 NBR2O15453 112 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 GSTZ1O43708 216 aaPredicted RBP7.7□□□□□ -1.18
LINC00339-210ENST00000635675 RBBP9O75884 186 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 SLC22A5O76082 557 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 PPYP01298 95 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 IGHG2P01859 326 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 PMP2P02689 132 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 IGKV1-16P04430 117 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 VSIG10L2P0DP72 767 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 AADACP22760 399 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 CNTFRP26992 372 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 DUTP33316 252 aaKnown RBP7.7□□□□□ -1.18
LINC00339-210ENST00000635675 TAS2R46P59540 309 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 DYRK1AQ13627 763 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 MMDQ15546 238 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 TRIM16LQ309B1 348 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 ARSJQ5FYB0 599 aaPredicted RBP7.7□□□□□ -1.18
LINC00339-210ENST00000635675 C9orf152Q5JTZ5 239 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 FAAP20Q6NZ36 180 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 PDPNQ86YL7 162 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 TOMM5Q8N4H5 51 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 ZNF645Q8N7E2 425 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 DDB2Q92466 427 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 RNF5Q99942 180 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 RASL11BQ9BPW5 248 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 KRTAP3-3Q9BYR6 98 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 KLK11Q9UBX7 282 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 ANK2Q01484 3957 aa7.7□□□□□ -1.18
LINC00339-210ENST00000635675 A0A1B0GVG6 124 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 LINC01548A6NM66 108 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 LINC00473A8K010 186 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 NDUFA3O95167 84 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 APOA2P02652 100 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 HLA-DMAP28067 261 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 RCVRNP35243 200 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 THBS3P49746 956 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 TAGLNQ01995 201 aaKnown RBP7.69□□□□□ -1.18
LINC00339-210ENST00000635675 EIF4EBP1Q13541 118 aaPredicted RBP7.69□□□□□ -1.18
LINC00339-210ENST00000635675 MSMO1Q15800 293 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 C5orf64Q2M2E5 130 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 CENPSQ8N2Z9 138 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 OR5H2Q8NGV7 314 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 FLYWCH2Q96CP2 140 aaKnown RBP7.69□□□□□ -1.18
LINC00339-210ENST00000635675 ADTRPQ96IZ2 230 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 CCL28Q9NRJ3 127 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 EHFQ9NZC4 300 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 RABL2AQ9UBK7 228 aaPredicted RBP7.69□□□□□ -1.18
LINC00339-210ENST00000635675 MTFP1Q9UDX5 166 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 RABL2BQ9UNT1 228 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 RBMX2Q9Y388 322 aaKnown RBP7.69□□□□□ -1.18
LINC00339-210ENST00000635675 M0QYG6 137 aa7.69□□□□□ -1.18
LINC00339-210ENST00000635675 RRHO14718 337 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms