RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 RNF141Q8WVD5 230 aa11.83□□□□□ -0.52
LINC00339-208ENST00000634934 RNF126Q9BV68 326 aa11.83□□□□□ -0.52
LINC00339-208ENST00000634934 C7orf69Q9H7B7 122 aa11.83□□□□□ -0.52
LINC00339-208ENST00000634934 METTL8Q9H825 291 aaKnown RBP11.83□□□□□ -0.52
LINC00339-208ENST00000634934 SIRT7Q9NRC8 400 aa11.83□□□□□ -0.52
LINC00339-208ENST00000634934 GNG12Q9UBI6 72 aa11.83□□□□□ -0.52
LINC00339-208ENST00000634934 CARHSP1Q9Y2V2 147 aaKnown RBP11.83□□□□□ -0.52
LINC00339-208ENST00000634934 DSCAML1Q8TD84 2053 aa11.83□□□□□ -0.52
LINC00339-208ENST00000634934 TOR1AO14656 332 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 HSPA12AO43301 675 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 LY6G6DO95868 133 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 PMP2P02689 132 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 RBP4P02753 201 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 IGHV1-8P0DP01 117 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 GATA3P23771 443 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 PXDC1Q5TGL8 231 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 EIF5AL1Q6IS14 154 aaKnown RBP11.82□□□□□ -0.52
LINC00339-208ENST00000634934 VMO1Q7Z5L0 202 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 ADAD2Q8NCV1 583 aaKnown RBP11.82□□□□□ -0.52
LINC00339-208ENST00000634934 OR52L2PQ8NGH6 319 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 OR10V1Q8NGI7 309 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 MARCH1Q8TCQ1 289 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 C2orf50Q96LR7 162 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 SUCNR1Q9BXA5 334 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 SIRPDQ9H106 197 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 LINC00574Q9H8X3 128 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 OR2S2Q9NQN1 319 aa11.82□□□□□ -0.52
LINC00339-208ENST00000634934 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.82□□□□□ -0.52
LINC00339-208ENST00000634934 IGKV1-6A0A0C4DH72 117 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 F2RL2O00254 374 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 IGHV3-7P01780 117 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 SUPT4H1P63272 117 aaKnown RBP11.81□□□□□ -0.52
LINC00339-208ENST00000634934 BTN1A1Q13410 526 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 HERPUD1Q15011 391 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 AADACL3Q5VUY0 350 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 FAM53AQ6NSI3 398 aaPredicted RBP11.81□□□□□ -0.52
LINC00339-208ENST00000634934 C1orf122Q6ZSJ8 110 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 OR10A7Q8NGE5 316 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 RTBDNQ9BSG5 229 aaPredicted RBP11.81□□□□□ -0.52
LINC00339-208ENST00000634934 CYTL1Q9NRR1 136 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 OR1A1Q9P1Q5 309 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 POMT1Q9Y6A1 747 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 ABCA1O95477 2261 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 CSPG4Q6UVK1 2322 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 DNASE2O00115 360 aaPredicted RBP11.81□□□□□ -0.52
LINC00339-208ENST00000634934 GAPDHP04406 335 aaKnown RBP11.81□□□□□ -0.52
LINC00339-208ENST00000634934 CTXN2P0C2S0 81 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 MMP9P14780 707 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 VAMP1P23763 118 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 PRTN3P24158 256 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 COX7A1P24310 79 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 PPP1CCP36873 323 aaKnown RBP11.81□□□□□ -0.52
LINC00339-208ENST00000634934 CEACAM6P40199 344 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 HTD2P86397 168 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 GNMTQ14749 295 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 CLEC9AQ6UXN8 241 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 OR10J5Q8NHC4 309 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 LEAP2Q969E1 77 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 TBX15Q96SF7 602 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 CABLES2Q9BTV7 478 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 TMEM133Q9H2Q1 129 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 NECAP2Q9NVZ3 263 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 GFOD1Q9NXC2 390 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 EHFQ9NZC4 300 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 KCNS2Q9ULS6 477 aa11.81□□□□□ -0.52
LINC00339-208ENST00000634934 NSD1Q96L73 2696 aaPredicted RBP11.8□□□□□ -0.52
LINC00339-208ENST00000634934 ZFHX3Q15911 3703 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 ANK3Q12955 4377 aaKnown RBP11.8□□□□□ -0.52
LINC00339-208ENST00000634934 TMEM218A2RU14 115 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 J3QLI3 93 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 CCSO14618 274 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 CD5LO43866 347 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 ATG12O94817 140 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 CTSDP07339 412 aaPredicted RBP11.8□□□□□ -0.52
LINC00339-208ENST00000634934 OR5H8P0DN80 308 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 AKR1C4P17516 323 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 LOXL3P58215 753 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 TMEM30BQ3MIR4 351 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 UTF1Q5T230 341 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 SVBPQ8N300 66 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 CLRN3Q8NCR9 226 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 OR52M1Q8NGK5 317 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 SEC22AQ96IW7 307 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 ZFP57Q9NU63 452 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 JPT1Q9UK76 154 aa11.8□□□□□ -0.52
LINC00339-208ENST00000634934 C5orf51A6NDU8 294 aa11.79□□□□□ -0.52
LINC00339-208ENST00000634934 PGAM2P15259 253 aa11.79□□□□□ -0.52
LINC00339-208ENST00000634934 GNG10P50151 68 aa11.79□□□□□ -0.52
LINC00339-208ENST00000634934 KLRD1Q13241 179 aa11.79□□□□□ -0.52
LINC00339-208ENST00000634934 SPAG16Q8N0X2 631 aa11.79□□□□□ -0.52
LINC00339-208ENST00000634934 ABHD12Q8N2K0 398 aa11.79□□□□□ -0.52
LINC00339-208ENST00000634934 PNKDQ8N490 385 aa11.79□□□□□ -0.52
LINC00339-208ENST00000634934 BPIFCQ8NFQ6 507 aa11.79□□□□□ -0.52
LINC00339-208ENST00000634934 OR13D1Q8NGV5 346 aa11.79□□□□□ -0.52
LINC00339-208ENST00000634934 LHX4Q969G2 390 aa11.79□□□□□ -0.52
LINC00339-208ENST00000634934 SMIM8Q96KF7 97 aa11.79□□□□□ -0.52
LINC00339-208ENST00000634934 NKX6-2Q9C056 277 aaPredicted RBP11.79□□□□□ -0.52
LINC00339-208ENST00000634934 ZC4H2Q9NQZ6 224 aa11.79□□□□□ -0.52
LINC00339-208ENST00000634934 YAE1D1Q9NRH1 226 aa11.79□□□□□ -0.52
LINC00339-208ENST00000634934 NF1P21359 2839 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms