RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 DEDDO75618 318 aa12.12□□□□□ -0.47
UBE3A-220ENST00000630424 OR2A4O95047 310 aa12.12□□□□□ -0.47
UBE3A-220ENST00000630424 IGKV3-20P01619 116 aa12.12□□□□□ -0.47
UBE3A-220ENST00000630424 HIST1H1BP16401 226 aaKnown RBP12.12□□□□□ -0.47
UBE3A-220ENST00000630424 TMEM186Q96B77 213 aa12.12□□□□□ -0.47
UBE3A-220ENST00000630424 VWCEQ96DN2 955 aa12.12□□□□□ -0.47
UBE3A-220ENST00000630424 OR2A7Q96R45 310 aa12.12□□□□□ -0.47
UBE3A-220ENST00000630424 BSPH1Q075Z2 132 aa12.12□□□□□ -0.47
UBE3A-220ENST00000630424 HLA-DRB5Q30154 266 aa12.12□□□□□ -0.47
UBE3A-220ENST00000630424 MYOZ3Q8TDC0 251 aa12.12□□□□□ -0.47
UBE3A-220ENST00000630424 FGFRL1Q8N441 504 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 WFDC6Q9BQY6 131 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 GSX1Q9H4S2 264 aaPredicted RBP12.11□□□□□ -0.47
UBE3A-220ENST00000630424 MRPS18AQ9NVS2 196 aaKnown RBP12.11□□□□□ -0.47
UBE3A-220ENST00000630424 RGPD4Q7Z3J3 1758 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 FAM90A10PA6NDY2 464 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 FAM90A18PA6NE21 464 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 FAM90A16PA6NEW6 464 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 FAM90A20PA6NIJ5 464 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 FAM90A8PA6NJQ4 464 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 FAM90A7PA6NKC0 464 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 FAM90A22PA8MWA6 464 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 FAM90A12PA8MX19 464 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 FAM90A5PA8MXJ8 464 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 FAM90A23PA8MXZ1 464 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 H0Y980 276 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 FAM90A15PP0C7V4 464 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 FAM90A13PP0C7W8 464 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 FAM90A14PP0C7W9 464 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 FAM90A24PP0C7X0 464 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 CDKN1AP38936 164 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 QTRT1Q9BXR0 403 aaKnown RBP12.11□□□□□ -0.47
UBE3A-220ENST00000630424 ZNF430Q9H8G1 570 aaPredicted RBP12.11□□□□□ -0.47
UBE3A-220ENST00000630424 V9GYH0 126 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 TET1Q8NFU7 2136 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 TMEM189A5PLL7 270 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 UBE2L6O14933 153 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 IGHV3-48P01763 117 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 IER3P46695 156 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 HSPE1P61604 102 aaKnown RBP12.11□□□□□ -0.47
UBE3A-220ENST00000630424 LRP11Q86VZ4 500 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 CHCHD2Q9Y6H1 151 aaPredicted RBP12.11□□□□□ -0.47
UBE3A-220ENST00000630424 ADAMTSL1Q8N6G6 1762 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 PGPA6NDG6 321 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 ISLRO14498 428 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 NPPCP23582 126 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 ELOBQ15370 118 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 SYT8Q8NBV8 401 aa12.11□□□□□ -0.47
UBE3A-220ENST00000630424 TNS1Q9HBL0 1735 aaKnown RBP12.11□□□□□ -0.47
UBE3A-220ENST00000630424 C5orf52A6NGY3 159 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 NPIPB11E5RHQ5 1161 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 M0R3E3 92 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 KLF4O43474 513 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 SUCLG1P53597 346 aaKnown RBP12.1□□□□□ -0.47
UBE3A-220ENST00000630424 MFAP2P55001 183 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 IRF3Q14653 427 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 OR8A1Q8NGG7 326 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 ANAPC16Q96DE5 110 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 GP6Q9HCN6 339 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 HSPB7Q9UBY9 170 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 JPT1Q9UK76 154 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 RAMP1O60894 148 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 MUC1P15941 1255 aaPredicted RBP12.1□□□□□ -0.47
UBE3A-220ENST00000630424 RPL29P47914 159 aaKnown RBP12.1□□□□□ -0.47
UBE3A-220ENST00000630424 NPBWR2P48146 333 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 MEOX2P50222 304 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 IGLV3-21P80748 117 aaPredicted RBP12.1□□□□□ -0.47
UBE3A-220ENST00000630424 TWIST1Q15672 202 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 TRGV3P03979 118 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 AWAT1Q58HT5 328 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 MEGF10Q96KG7 1140 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 SNURFLB1AK76 121 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 VAX1Q5SQQ9 334 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 FAM201AQ5SY85 155 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 NEU4Q8WWR8 484 aaPredicted RBP12.1□□□□□ -0.47
UBE3A-220ENST00000630424 ISOC2Q96AB3 205 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 SCMH1Q96GD3 660 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 NEURL2Q9BR09 285 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 CHRNA10Q9GZZ6 450 aa12.1□□□□□ -0.47
UBE3A-220ENST00000630424 A0A0B4J293 547 aa12.09□□□□□ -0.47
UBE3A-220ENST00000630424 MARCH11A6NNE9 402 aa12.09□□□□□ -0.47
UBE3A-220ENST00000630424 KLF7O75840 302 aaPredicted RBP12.09□□□□□ -0.47
UBE3A-220ENST00000630424 ZP3P21754 424 aa12.09□□□□□ -0.47
UBE3A-220ENST00000630424 COMPP49747 757 aaPredicted RBP12.09□□□□□ -0.47
UBE3A-220ENST00000630424 TMEM252Q8N6L7 170 aa12.09□□□□□ -0.47
UBE3A-220ENST00000630424 TMEM222Q9H0R3 208 aa12.09□□□□□ -0.47
UBE3A-220ENST00000630424 ARAP2Q8WZ64 1704 aa12.09□□□□□ -0.47
UBE3A-220ENST00000630424 PCNX1Q96RV3 2341 aa12.09□□□□□ -0.47
UBE3A-220ENST00000630424 IGKV1D-42A0A075B6H8 117 aa12.09□□□□□ -0.47
UBE3A-220ENST00000630424 IFI6P09912 130 aa12.09□□□□□ -0.47
UBE3A-220ENST00000630424 ST6GAL2Q96JF0 529 aa12.09□□□□□ -0.47
UBE3A-220ENST00000630424 RSG1Q9BU20 258 aa12.09□□□□□ -0.47
UBE3A-220ENST00000630424 KBTBD11O94819 623 aa12.09□□□□□ -0.47
UBE3A-220ENST00000630424 C12orf57Q99622 126 aa12.09□□□□□ -0.47
UBE3A-220ENST00000630424 SSBP3Q9BWW4 388 aaPredicted RBP12.09□□□□□ -0.47
UBE3A-220ENST00000630424 DPM3Q9P2X0 92 aa12.09□□□□□ -0.47
UBE3A-220ENST00000630424 SCN2AQ99250 2005 aa12.09□□□□□ -0.47
UBE3A-220ENST00000630424 PLXNB2O15031 1838 aa12.09□□□□□ -0.47
UBE3A-220ENST00000630424 ZNF324O75467 553 aaPredicted RBP12.09□□□□□ -0.47
UBE3A-220ENST00000630424 S1PR2O95136 353 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms