RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 IGHV3-35A0A0C4DH35 117 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 H1F0P07305 194 aaKnown RBP4□□□□□ -1.77
LINC00649-220ENST00000628906 GSTT2P0CG29 244 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 GSTT2BP0CG30 244 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 DBTP11182 482 aaKnown RBP4□□□□□ -1.77
LINC00649-220ENST00000628906 RPA2P15927 270 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 PRKACBP22694 351 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 GSSP48637 474 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 KRTAP10-8P60410 259 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 PAFAH1B2P68402 229 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 ROM1Q03395 351 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 ACOT6Q3I5F7 207 aaPredicted RBP4□□□□□ -1.77
LINC00649-220ENST00000628906 ZNF829Q3KNS6 432 aaPredicted RBP4□□□□□ -1.77
LINC00649-220ENST00000628906 ELP2Q6IA86 826 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 SSX9Q7RTT3 188 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 VTCN1Q7Z7D3 282 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 SUMF2Q8NBJ7 301 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 CIRBP-AS1Q8TBR5 109 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 EEF1AKMT3Q96AZ1 226 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 OR52B2Q96RD2 323 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 DPCDQ9BVM2 203 aaPredicted RBP4□□□□□ -1.77
LINC00649-220ENST00000628906 OR2S2Q9NQN1 319 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 IL20Q9NYY1 176 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 CCDC167Q9P0B6 97 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 PIPOXQ9P0Z9 390 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 S4R3C0 116 aa4□□□□□ -1.77
LINC00649-220ENST00000628906 IGKV3-7A0A075B6H7 116 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 F5H768 121 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 CHEK1O14757 476 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 RAB29O14966 203 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 ARPC2O15144 300 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 BIRC5O15392 142 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 MPPED1O15442 326 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 SELENOFO60613 162 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 YPEL1O60688 119 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 CRYGCP07315 174 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 GNB3P16520 340 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 CPEP16870 476 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 LIPEQ05469 1076 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 IL13RA2Q14627 380 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 LRRC23Q53EV4 343 aaPredicted RBP3.99□□□□□ -1.77
LINC00649-220ENST00000628906 PLET1Q6UQ28 207 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 SLC25A42Q86VD7 318 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 ZNF679Q8IYX0 411 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 FAM24BQ8N5W8 94 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 TEX45Q8NA69 505 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 SRSF12Q8WXF0 261 aaKnown RBP3.99□□□□□ -1.77
LINC00649-220ENST00000628906 PP6455Q8WZ26 134 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 YPEL2Q96QA6 119 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 RHPN1-AS1Q9BWJ2 59 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 IFI27L2Q9H2X8 130 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 IFT22Q9H7X7 185 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 MOB1AQ9H8S9 216 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 PPCSQ9HAB8 311 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 TAS2R1Q9NYW7 299 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 CACNG5Q9UF02 275 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 MAGEL2Q9UJ55 1249 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 OR52A1Q9UKL2 312 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 ZNF257Q9Y2Q1 563 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 YTHDF2Q9Y5A9 579 aaKnown RBP3.99□□□□□ -1.77
LINC00649-220ENST00000628906 ENPP4Q9Y6X5 453 aa3.99□□□□□ -1.77
LINC00649-220ENST00000628906 TRAV2A0A0B4J234 112 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 PRR32B1ATL7 298 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 NPIPB6E9PJ23 425 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 SIVA1O15304 175 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 IGLV2-11P01706 119 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 SHBGP04278 402 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 IGFBP3P17936 291 aaPredicted RBP3.98□□□□□ -1.77
LINC00649-220ENST00000628906 ATF1P18846 271 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 HOXA5P20719 270 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 PPP1CCP36873 323 aaKnown RBP3.98□□□□□ -1.77
LINC00649-220ENST00000628906 HCCSP53701 268 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 SF3A3Q12874 501 aaKnown RBP eCLIP3.98□□□□□ -1.77
LINC00649-220ENST00000628906 TSPAN31Q12999 210 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 GNMTQ14749 295 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 RPL39P5Q59GN2 51 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 C6orf183Q5T699 404 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 SYT6Q5T7P8 510 aaPredicted RBP3.98□□□□□ -1.77
LINC00649-220ENST00000628906 CYP2R1Q6VVX0 501 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 UTS2BQ765I0 119 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 BCDIN3DQ7Z5W3 292 aaKnown RBP3.98□□□□□ -1.77
LINC00649-220ENST00000628906 LRRTM1Q86UE6 522 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 Q8N814 137 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 CCDC54Q8NEL0 328 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 RFT1Q96AA3 541 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 CMTM3Q96MX0 182 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 C7orf26Q96N11 449 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 PAXXQ9BUH6 204 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 MED20Q9H944 212 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 DNAJC4Q9NNZ3 241 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 SLC35D1Q9NTN3 355 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 ZNF581Q9P0T4 197 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 XCL2Q9UBD3 114 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 PFDN2Q9UHV9 154 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 LAMP5Q9UJQ1 280 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 JPT1Q9UK76 154 aa3.98□□□□□ -1.77
LINC00649-220ENST00000628906 KNCNA6PVL3 124 aa3.97□□□□□ -1.77
LINC00649-220ENST00000628906 LINC00473A8K010 186 aa3.97□□□□□ -1.77
LINC00649-220ENST00000628906 C15orf62A8K5M9 175 aa3.97□□□□□ -1.77
LINC00649-220ENST00000628906 AIPO00170 330 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms