RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 NUDT3O95989 172 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 CXorf67Q86X51 503 aaPredicted RBP7.7□□□□□ -1.18
VCL-206ENST00000623461 OR5A1Q8NGJ0 315 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 GNRHR2Q96P88 292 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 SPSB2Q99619 263 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 RTBDNQ9BSG5 229 aaPredicted RBP7.7□□□□□ -1.18
VCL-206ENST00000623461 DOPEY2Q9Y3R5 2298 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 LOC389332A0A1B0GUA5 103 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 NDUFS6O75380 124 aaKnown RBP7.7□□□□□ -1.18
VCL-206ENST00000623461 TM4SF19Q96DZ7 209 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 PRDM13Q9H4Q3 707 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 OR51B2Q9Y5P1 312 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 NUDT10Q8NFP7 164 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 PLPPR2Q96GM1 343 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 LHX9Q9NQ69 397 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 A0A1W2PP11 408 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 J3QR06 171 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 CLDN14O95500 239 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 CRYBA2P53672 197 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 FGFRL1Q8N441 504 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 PCOLCE2Q9UKZ9 415 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 TRAV38-1A0A0B4J264 116 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 IGHV5-51A0A0C4DH38 117 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 OR4A8P0C604 315 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 SRSF5Q13243 272 aaKnown RBP7.69□□□□□ -1.18
VCL-206ENST00000623461 TWIST1Q15672 202 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 FAM27BQ5VT28 67 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 VASH2Q86V25 355 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 OR8B2Q96RD0 313 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 ABHD14AQ9BUJ0 271 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 DERL1Q9BUN8 251 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 ZNF716A6NP11 495 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 SLC25A17O43808 307 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 PRRX1P54821 245 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 CEACAM21Q3KPI0 293 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 SIGMAR1Q99720 223 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 WNT10AQ9GZT5 417 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 SCTP09683 121 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 WNT5AP41221 380 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 KIAA1644Q3SXP7 199 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 NR2C2APQ86WQ0 139 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 ABHD3Q8WU67 409 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 NUDT11Q96G61 164 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 ZNF430Q9H8G1 570 aaPredicted RBP7.69□□□□□ -1.18
VCL-206ENST00000623461 SOX21Q9Y651 276 aaPredicted RBP7.69□□□□□ -1.18
VCL-206ENST00000623461 M0R3E3 92 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 RPS20P60866 119 aaKnown RBP7.69□□□□□ -1.18
VCL-206ENST00000623461 RPEQ96AT9 228 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 TM2D1Q9BX74 207 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 MRPL32Q9BYC8 188 aaKnown RBP7.69□□□□□ -1.18
VCL-206ENST00000623461 SPCS1Q9Y6A9 102 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 TMEM189A5PLL7 270 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 SHISA7A6NL88 538 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 HRKO00198 91 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 IL4P05112 153 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 RPL23P62829 140 aaKnown RBP7.69□□□□□ -1.18
VCL-206ENST00000623461 P2RY6Q15077 328 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 SLC25A47Q6Q0C1 308 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 PRNTQ86SH4 94 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 NEUROG1Q92886 237 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 MAP1LC3AQ9H492 121 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 FAM60AQ9NP50 221 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 TMEM140Q9NV12 185 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 SCN2AQ99250 2005 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 LMX1BO60663 402 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 PEBP1P30086 187 aaKnown RBP7.69□□□□□ -1.18
VCL-206ENST00000623461 HBBP68871 147 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 APOBEC4Q8WW27 367 aaKnown RBP7.69□□□□□ -1.18
VCL-206ENST00000623461 C5orf30Q96GV9 206 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 PATE4P0C8F1 98 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 DRD3P35462 400 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 SMAGPQ0VAQ4 97 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 GABRG3Q99928 467 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 RASL11BQ9BPW5 248 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 PLSCR2Q9NRY7 297 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 HIGD1AQ9Y241 93 aa7.69□□□□□ -1.18
VCL-206ENST00000623461 F5H697 171 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 CA7P43166 264 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 MEOX1P50221 254 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 SNAI3Q3KNW1 292 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 OR10J3Q5JRS4 329 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 CADM4Q8NFZ8 388 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 PHF7Q9BWX1 381 aaPredicted RBP7.68□□□□□ -1.18
VCL-206ENST00000623461 GPR35Q9HC97 309 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 FOXD3Q9UJU5 478 aaPredicted RBP7.68□□□□□ -1.18
VCL-206ENST00000623461 AMBPP02760 352 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 C8orf88P0DMB2 117 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 CKS2P33552 79 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 KCNMB1Q16558 191 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 PNKDQ8N490 385 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 SPRY3O43610 288 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 HYPMO75409 117 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 GCHFRP30047 84 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 FXYD3Q14802 87 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 ZNF324BQ6AW86 544 aaPredicted RBP7.68□□□□□ -1.18
VCL-206ENST00000623461 RHBDD2Q6NTF9 364 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 DEFB123Q8N688 67 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 SMOC1Q9H4F8 434 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 NRN1Q9NPD7 142 aa7.68□□□□□ -1.18
VCL-206ENST00000623461 TRAV39A0A0B4J263 110 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms