RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 MRPS17Q9Y2R5 130 aaKnown RBP11.88□□□□□ -0.51
LDB3-209ENST00000623056 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.88□□□□□ -0.51
LDB3-209ENST00000623056 C5orf49A4QMS7 147 aa11.88□□□□□ -0.51
LDB3-209ENST00000623056 DLL1O00548 723 aa11.88□□□□□ -0.51
LDB3-209ENST00000623056 SERF1AO75920 110 aa11.88□□□□□ -0.51
LDB3-209ENST00000623056 LHX2P50458 406 aa11.88□□□□□ -0.51
LDB3-209ENST00000623056 OR5I1Q13606 314 aa11.88□□□□□ -0.51
LDB3-209ENST00000623056 FAM58AQ8N1B3 248 aa11.88□□□□□ -0.51
LDB3-209ENST00000623056 CADM4Q8NFZ8 388 aa11.88□□□□□ -0.51
LDB3-209ENST00000623056 VN1R17PQ8TDU5 208 aa11.88□□□□□ -0.51
LDB3-209ENST00000623056 TNRC6AQ8NDV7 1962 aaKnown RBP11.88□□□□□ -0.51
LDB3-209ENST00000623056 MDFIC2A0A1B0GVS7 189 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 F6UZH7 168 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 SYNGR4O95473 234 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 ESDP10768 282 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 OR10D3Q8NH80 312 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 KCNIP2Q9NS61 270 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 VPS13AQ96RL7 3174 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 TRBV20OR9-2A0A075B6H5 130 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 LOC102723996A0A087X1L8 192 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 IGHV1-45A0A0A0MS14 117 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 A0A0G2JMM0 328 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 A0A1W2PPB8 328 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 A0A1W2PRS3 328 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 KIR3DP1A8MWS1 328 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 RAMP3O60896 148 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 KRASP01116 189 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 KITLGP21583 273 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 CBLN1P23435 193 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 G6PCP35575 357 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 MSMO1Q15800 293 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 VWC2Q2TAL6 325 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 ABHD3Q8WU67 409 aa11.87□□□□□ -0.51
LDB3-209ENST00000623056 A0A096LPE4 126 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 A0A1W2PPZ6 126 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 LRRC30A6NM36 301 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 C17orf112F2Z3M2 114 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 ZG16O60844 167 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 SERPINA7P05543 415 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 CRISP2P16562 243 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 CD82P27701 267 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 TFPI2P48307 235 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 GCSAMLQ5JQS6 135 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 C9orf135Q5VTT2 229 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 DTD1Q8TEA8 209 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 KCNE4Q8WWG9 221 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 ZDHHC16Q969W1 377 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 DMDP11532 3685 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 TRAV38-1A0A0B4J264 116 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 ODAMA1E959 279 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 RNF212BA8MTL3 300 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 NGFP01138 241 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 P0C879 139 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 EPHA8P29322 1005 aaPredicted RBP11.86□□□□□ -0.51
LDB3-209ENST00000623056 SRD5A2P31213 254 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 COMPP49747 757 aaPredicted RBP11.86□□□□□ -0.51
LDB3-209ENST00000623056 COL5A1-AS1Q5SY13 56 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 Q6P435 159 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 MOB1BQ7L9L4 216 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 OR5AU1Q8NGC0 362 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 APOBEC3DQ96AK3 386 aaPredicted RBP11.86□□□□□ -0.51
LDB3-209ENST00000623056 IMMP1LQ96LU5 166 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 PRRG4Q9BZD6 226 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 TRAPPC2LQ9UL33 140 aa11.86□□□□□ -0.51
LDB3-209ENST00000623056 IGHV5-10-1A0A0J9YXX1 117 aa11.85□□□□□ -0.51
LDB3-209ENST00000623056 RHBDL1O75783 438 aa11.85□□□□□ -0.51
LDB3-209ENST00000623056 COX6A1P12074 109 aa11.85□□□□□ -0.51
LDB3-209ENST00000623056 ARF1P84077 181 aaKnown RBP11.85□□□□□ -0.51
LDB3-209ENST00000623056 ZNF816Q0VGE8 651 aaPredicted RBP11.85□□□□□ -0.51
LDB3-209ENST00000623056 Q8N7P7 452 aa11.85□□□□□ -0.51
LDB3-209ENST00000623056 MRPL18Q9H0U6 180 aaKnown RBP11.85□□□□□ -0.51
LDB3-209ENST00000623056 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.85□□□□□ -0.51
LDB3-209ENST00000623056 A0A1W2PQM1 296 aa11.85□□□□□ -0.51
LDB3-209ENST00000623056 F2Z2F3 143 aa11.85□□□□□ -0.51
LDB3-209ENST00000623056 SIAH2O43255 324 aa11.85□□□□□ -0.51
LDB3-209ENST00000623056 HNF1AP20823 631 aa11.85□□□□□ -0.51
LDB3-209ENST00000623056 TIMP3P35625 211 aa11.85□□□□□ -0.51
LDB3-209ENST00000623056 RAB7AP51149 207 aa11.85□□□□□ -0.51
LDB3-209ENST00000623056 ZNF497Q6ZNH5 498 aa11.85□□□□□ -0.51
LDB3-209ENST00000623056 OR10G8Q8NGN5 311 aa11.85□□□□□ -0.51
LDB3-209ENST00000623056 NCKAP5O14513 1909 aa11.84□□□□□ -0.51
LDB3-209ENST00000623056 SIRPB1O00241 398 aa11.84□□□□□ -0.51
LDB3-209ENST00000623056 SS18L1O75177 396 aaPredicted RBP11.84□□□□□ -0.51
LDB3-209ENST00000623056 THBS3P49746 956 aa11.84□□□□□ -0.51
LDB3-209ENST00000623056 ZNF90Q03938 601 aa11.84□□□□□ -0.51
LDB3-209ENST00000623056 TRIP6Q15654 476 aaKnown RBP11.84□□□□□ -0.51
LDB3-209ENST00000623056 SPINK9Q5DT21 86 aa11.84□□□□□ -0.51
LDB3-209ENST00000623056 GUSBP11Q6P575 273 aa11.84□□□□□ -0.51
LDB3-209ENST00000623056 RPS19BP1Q86WX3 136 aaKnown RBP11.84□□□□□ -0.51
LDB3-209ENST00000623056 BAGE3Q86Y29 109 aa11.84□□□□□ -0.51
LDB3-209ENST00000623056 BAGE2Q86Y30 109 aa11.84□□□□□ -0.51
LDB3-209ENST00000623056 CCDC74BQ96LY2 380 aa11.84□□□□□ -0.51
LDB3-209ENST00000623056 PCED1AQ9H1Q7 454 aa11.84□□□□□ -0.51
LDB3-209ENST00000623056 ZFP30Q9Y2G7 519 aa11.84□□□□□ -0.51
LDB3-209ENST00000623056 ZNF503-AS2A6NEH8 195 aa11.83□□□□□ -0.51
LDB3-209ENST00000623056 TCF21O43680 179 aa11.83□□□□□ -0.51
LDB3-209ENST00000623056 GDF9O60383 454 aa11.83□□□□□ -0.51
LDB3-209ENST00000623056 CYC1P08574 325 aa11.83□□□□□ -0.51
LDB3-209ENST00000623056 RFPL3SP0C7P2 107 aa11.83□□□□□ -0.51
LDB3-209ENST00000623056 RPL30P62888 115 aaKnown RBP11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms