RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 RAB1BQ9H0U4 201 aa13.8□□□□□ -0.2
GABRB3-215ENST00000622697 TP53BP1Q12888 1972 aaPredicted RBP13.8□□□□□ -0.2
GABRB3-215ENST00000622697 PPIAL4EA0A075B759 164 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 PPIAL4DF5H284 164 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 PPIAL4FP0DN26 164 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 HCP5Q6MZN7 132 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 RAB1CQ92928 201 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 RASL11BQ9BPW5 248 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 TNFRSF19Q9NS68 423 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 PPIAL4AQ9Y536 164 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 MARCH11A6NNE9 402 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 ABHD12Q8N2K0 398 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 WFIKKN1Q96NZ8 548 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 HEATR5BQ9P2D3 2071 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 IGKV1-9A0A0C4DH69 117 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 LOC390937A0A1W2PQ73 354 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 A8MXK9 166 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 ZNF596Q8TC21 504 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 OR5P3Q8WZ94 311 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 ODAMA1E959 279 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 IGLV3-19P01714 112 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 RNF2Q99496 336 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 TCAPO15273 167 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 OR4A8P0C604 315 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 SRSF3P84103 164 aaKnown RBP13.79□□□□□ -0.2
GABRB3-215ENST00000622697 OR8B3Q8NGG8 313 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 OR8B2Q96RD0 313 aa13.79□□□□□ -0.2
GABRB3-215ENST00000622697 IGKV3-7A0A075B6H7 116 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 CEACAM3P40198 252 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 TM2D1Q9BX74 207 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 IGHV3-48P01763 117 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 CFHR1Q03591 330 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 PAQR4Q8N4S7 273 aaPredicted RBP13.78□□□□□ -0.2
GABRB3-215ENST00000622697 NHLRC2Q8NBF2 726 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 PRR33A8MZF0 331 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 ACP1P24666 158 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 LYZL4Q96KX0 146 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 MRPL13Q9BYD1 178 aaKnown RBP13.78□□□□□ -0.2
GABRB3-215ENST00000622697 GPR61Q9BZJ8 451 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 KCNMB2Q9Y691 235 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 FREM3P0C091 2139 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 CBY3A6NI87 242 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 MMDQ15546 238 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 C1orf185Q5T7R7 199 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 LINC00518Q8N0U6 118 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 OR4C5Q8NGB2 326 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 LPAR2Q9HBW0 351 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 TMEM140Q9NV12 185 aa13.78□□□□□ -0.2
GABRB3-215ENST00000622697 M0R143 59 aa13.77□□□□□ -0.2
GABRB3-215ENST00000622697 STPG1Q5TH74 334 aa13.77□□□□□ -0.2
GABRB3-215ENST00000622697 TRBV23-1A0A0A0MS06 115 aa13.77□□□□□ -0.2
GABRB3-215ENST00000622697 UCP3P55916 312 aa13.77□□□□□ -0.2
GABRB3-215ENST00000622697 SAXO1Q8IYX7 474 aa13.77□□□□□ -0.2
GABRB3-215ENST00000622697 RNF126Q9BV68 326 aa13.77□□□□□ -0.2
GABRB3-215ENST00000622697 THYN1Q9P016 225 aa13.77□□□□□ -0.2
GABRB3-215ENST00000622697 GOLT1BQ9Y3E0 138 aa13.77□□□□□ -0.2
GABRB3-215ENST00000622697 YTHDF2Q9Y5A9 579 aaKnown RBP13.77□□□□□ -0.2
GABRB3-215ENST00000622697 UMODP07911 640 aa13.77□□□□□ -0.21
GABRB3-215ENST00000622697 ZNF714Q96N38 554 aa13.77□□□□□ -0.21
GABRB3-215ENST00000622697 PAXXQ9BUH6 204 aa13.77□□□□□ -0.21
GABRB3-215ENST00000622697 APCSP02743 223 aa13.77□□□□□ -0.21
GABRB3-215ENST00000622697 KCNMB1Q16558 191 aa13.77□□□□□ -0.21
GABRB3-215ENST00000622697 ZDHHC16Q969W1 377 aa13.77□□□□□ -0.21
GABRB3-215ENST00000622697 MS4A5Q9H3V2 200 aa13.77□□□□□ -0.21
GABRB3-215ENST00000622697 CALYQ9NYX4 217 aa13.77□□□□□ -0.21
GABRB3-215ENST00000622697 FADS6Q8N9I5 356 aa13.77□□□□□ -0.21
GABRB3-215ENST00000622697 ZNRF1Q8ND25 227 aa13.77□□□□□ -0.21
GABRB3-215ENST00000622697 PERPQ96FX8 193 aa13.77□□□□□ -0.21
GABRB3-215ENST00000622697 TBX15Q96SF7 602 aa13.77□□□□□ -0.21
GABRB3-215ENST00000622697 TMUB1Q9BVT8 246 aa13.77□□□□□ -0.21
GABRB3-215ENST00000622697 RPRMQ9NS64 109 aa13.77□□□□□ -0.21
GABRB3-215ENST00000622697 IL19Q9UHD0 177 aa13.77□□□□□ -0.21
GABRB3-215ENST00000622697 CD82P27701 267 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 OR10S1Q8NGN2 331 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 ZNF703Q9H7S9 590 aaPredicted RBP13.76□□□□□ -0.21
GABRB3-215ENST00000622697 SPTBN2O15020 2390 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 WDR81Q562E7 1941 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 CEACAM18A8MTB9 384 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 NPIPB7O75200 414 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 TCTAP57738 103 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 P2RY6Q15077 328 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 C5orf17Q8NAS9 161 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 A0A0A6YYD4 124 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 SMIM17P0DL12 118 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 PRR7Q8TB68 274 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 CDX4O14627 284 aaPredicted RBP13.76□□□□□ -0.21
GABRB3-215ENST00000622697 ZNF735P0CB33 412 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 ARL14EPLP0DKL9 152 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 PKIAP61925 76 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 ELOBQ15370 118 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 OR8I2Q8N0Y5 310 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 UFC1Q9Y3C8 167 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 HILPDAQ9Y5L2 63 aa13.76□□□□□ -0.21
GABRB3-215ENST00000622697 HIST1H1BP16401 226 aaKnown RBP13.75□□□□□ -0.21
GABRB3-215ENST00000622697 MFAP2P55001 183 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 STARD4Q96DR4 205 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 SNRNP200O75643 2136 aaKnown RBP13.75□□□□□ -0.21
GABRB3-215ENST00000622697 LNP1A1A4G5 178 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 FXYD3Q14802 87 aa13.75□□□□□ -0.21
GABRB3-215ENST00000622697 SGK494Q96LW2 274 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms