RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 DIRC3C9JPN6 131 aa10.57□□□□□ -0.72
LITAF-221ENST00000622633 BRI3O95415 125 aa10.57□□□□□ -0.72
LITAF-221ENST00000622633 RFPL3SP0C7P2 107 aa10.57□□□□□ -0.72
LITAF-221ENST00000622633 ATP6V0CP27449 155 aa10.57□□□□□ -0.72
LITAF-221ENST00000622633 SMAGPQ0VAQ4 97 aa10.57□□□□□ -0.72
LITAF-221ENST00000622633 PNKDQ8N490 385 aa10.57□□□□□ -0.72
LITAF-221ENST00000622633 TMEM217Q8N7C4 229 aa10.57□□□□□ -0.72
LITAF-221ENST00000622633 OR4P4Q8NGL7 312 aa10.57□□□□□ -0.72
LITAF-221ENST00000622633 OR1B1Q8NGR6 318 aa10.57□□□□□ -0.72
LITAF-221ENST00000622633 OR2T10Q8NGZ9 312 aa10.57□□□□□ -0.72
LITAF-221ENST00000622633 PIGCQ92535 297 aa10.57□□□□□ -0.72
LITAF-221ENST00000622633 GPR6P46095 362 aaPredicted RBP10.56□□□□□ -0.72
LITAF-221ENST00000622633 CEBPDP49716 269 aaPredicted RBP10.56□□□□□ -0.72
LITAF-221ENST00000622633 CLDN15P56746 228 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 ADIRFQ15847 76 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 CEACAM16Q2WEN9 425 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 TMEM42Q69YG0 159 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 WDR82Q6UXN9 313 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 Q6ZPA2 131 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 LIAT1Q6ZQX7 453 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 GGNQ86UU5 652 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 MUC15Q8N387 334 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 OR2Y1Q8NGV0 311 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 PSMF1Q92530 271 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 C18orf12Q96KH6 178 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 GUCD1Q96NT3 240 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 ZNF716A6NP11 495 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 SH2D1BO14796 132 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 ZNHIT1O43257 154 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 LIPFP07098 398 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 PLCXD3Q63HM9 321 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 IGF2-ASQ6U949 168 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 MSI2Q96DH6 328 aaKnown RBP10.56□□□□□ -0.72
LITAF-221ENST00000622633 RSG1Q9BU20 258 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 OR2H1Q9GZK4 316 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 GTSF1LQ9H1H1 148 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 PXMP4Q9Y6I8 212 aa10.56□□□□□ -0.72
LITAF-221ENST00000622633 SHANK1Q9Y566 2161 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 GRIFINA4D1Z8 144 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 FAM166BA8MTA8 275 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 TRAPPC2LH3BP13 241 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 PHF1O43189 567 aaPredicted RBP10.55□□□□□ -0.72
LITAF-221ENST00000622633 IGLC1P0CG04 106 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 AADACP22760 399 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 ASCL1P50553 236 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 PSG9Q00887 426 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 MALLQ13021 153 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 FFAR4Q5NUL3 377 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 GPR157Q5UAW9 335 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 FOXB1Q99853 325 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 LRFN3Q9BTN0 628 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 PATZ1Q9HBE1 687 aaKnown RBP10.55□□□□□ -0.72
LITAF-221ENST00000622633 ZNF286AQ9HBT8 521 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 TRAPPC1Q9Y5R8 145 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 DMDP11532 3685 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 hCG_38984A0A1B0GV85 526 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 IGHV3-9P01782 118 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 P04436 131 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 DUSP1P28562 367 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 SRD5A2P31213 254 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 ZNF83P51522 516 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 FUT6P51993 359 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 RPS18P62269 152 aaKnown RBP10.55□□□□□ -0.72
LITAF-221ENST00000622633 RTP5Q14D33 572 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 SRSF7Q16629 238 aaKnown RBP eCLIP10.55□□□□□ -0.72
LITAF-221ENST00000622633 KRTAP27-1Q3LI81 207 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 WIPI1Q5MNZ9 446 aaPredicted RBP10.55□□□□□ -0.72
LITAF-221ENST00000622633 LGI3Q8N145 548 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 OR5B3Q8NH48 314 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 OR10D3Q8NH80 312 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 ZNF442Q9H7R0 627 aa10.55□□□□□ -0.72
LITAF-221ENST00000622633 CISD1Q9NZ45 108 aaKnown RBP10.55□□□□□ -0.72
LITAF-221ENST00000622633 PDCD6O75340 191 aa10.54□□□□□ -0.72
LITAF-221ENST00000622633 FOLR3P41439 243 aa10.54□□□□□ -0.72
LITAF-221ENST00000622633 NPBWR2P48146 333 aa10.54□□□□□ -0.72
LITAF-221ENST00000622633 BAXQ07812 192 aa10.54□□□□□ -0.72
LITAF-221ENST00000622633 PMS2CLQ68D20 193 aa10.54□□□□□ -0.72
LITAF-221ENST00000622633 KLHDC1Q8N7A1 406 aa10.54□□□□□ -0.72
LITAF-221ENST00000622633 LRTM2Q8N967 370 aa10.54□□□□□ -0.72
LITAF-221ENST00000622633 TAAR6Q96RI8 345 aa10.54□□□□□ -0.72
LITAF-221ENST00000622633 GNG13Q9P2W3 67 aa10.54□□□□□ -0.72
LITAF-221ENST00000622633 NAT8Q9UHE5 227 aa10.54□□□□□ -0.72
LITAF-221ENST00000622633 PRSS50Q9UI38 385 aa10.54□□□□□ -0.72
LITAF-221ENST00000622633 PATE3B3GLJ2 98 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 ST8SIA3O43173 380 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 SERF1AO75920 110 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 OR7C1O76099 320 aaPredicted RBP10.53□□□□□ -0.72
LITAF-221ENST00000622633 OTX2P32243 289 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 KRTDAPP60985 99 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 HERV-K104P61576 105 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 Q0VFX4 171 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 MSMO1Q15800 293 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 OR8I2Q8N0Y5 310 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 KIAA2026Q5HYC2 2103 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 TRAV8-6A0A0B4J262 113 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 DNPH1O43598 174 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 OR10J4P0C629 311 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 KITLGP21583 273 aa10.53□□□□□ -0.72
LITAF-221ENST00000622633 RBM11P57052 281 aaKnown RBP10.53□□□□□ -0.72
LITAF-221ENST00000622633 DAZAP2Q15038 168 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms