RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 PTPRSQ13332 1948 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 LOC102725191A0A1B0GVB3 256 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 IGKV1D-16P01601 117 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 REG1AP05451 166 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 SERPINE2P07093 398 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 NPBWR2P48146 333 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 DMRTC1Q5HYR2 192 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 NHLRC2Q8NBF2 726 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 GATAD1Q8WUU5 269 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 DOCK11Q5JSL3 2073 aa6.75□□□□□ -1.33
VPS11-209ENST00000622309 C7orf71A4D174 169 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 C11orf94C9JXX5 98 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 PLPP3O14495 311 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 MPPED1O15442 326 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 CT62P0C5K7 136 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 OTX2P32243 289 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 TMPRSS3P57727 454 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 ID3Q02535 119 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 AESQ08117 197 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 ZNF141Q15928 474 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 NNATQ16517 81 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 CEACAM21Q3KPI0 293 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 OR10J3Q5JRS4 329 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 ZNF324BQ6AW86 544 aaPredicted RBP6.74□□□□□ -1.33
VPS11-209ENST00000622309 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.74□□□□□ -1.33
VPS11-209ENST00000622309 UBALD2Q8IYN6 164 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 OR5AS1Q8N127 324 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 SLC25A40Q8TBP6 338 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 TM2D1Q9BX74 207 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 TMEM222Q9H0R3 208 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 ARL2-SNX15V9GYD0 113 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 EGR1P18146 543 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 CMPK1P30085 196 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 HBG1P69891 147 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 HBG2P69892 147 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 PDGFRLQ15198 375 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 GABRA6Q16445 453 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 SGCBQ16585 318 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 SLC25A34Q6PIV7 304 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 WDR74Q6RFH5 385 aaPredicted RBP6.74□□□□□ -1.33
VPS11-209ENST00000622309 OR5P3Q8WZ94 311 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 FAM110AQ9BQ89 295 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 APOOQ9BUR5 198 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 TRAV9-1A0A075B6T8 112 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 SAA2-SAA4A0A096LPE2 208 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 C19orf67A6NJJ6 358 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 SMIM17P0DL12 118 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 GATA3P23771 443 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 GDF1P27539 372 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 THBS3P49746 956 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 PSG4Q00888 419 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 TGFBR3Q03167 851 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 HSD52Q0P140 79 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 PRICKLE4Q2TBC4 344 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 KIAA1644Q3SXP7 199 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 PDLIM3Q53GG5 364 aaPredicted RBP6.74□□□□□ -1.33
VPS11-209ENST00000622309 LINC00696Q6ZRV3 163 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 ZNF439Q8NDP4 499 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 OR4C3Q8NH37 302 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 SSBP4Q9BWG4 385 aaPredicted RBP6.74□□□□□ -1.33
VPS11-209ENST00000622309 NPVFQ9HCQ7 196 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 DAPP1Q9UN19 280 aa6.74□□□□□ -1.33
VPS11-209ENST00000622309 MPDZO75970 2070 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 TRBV9A0A0B4J1U6 114 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 CTXND1A0A1B0GTU2 59 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 A0A1W2PR80 420 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 FAM231BA6NCW3 169 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 GPR75O95800 540 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 RHOBP62745 196 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 PDCD1Q15116 288 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 MTURNQ8N3F0 131 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 RPP25LQ8N5L8 163 aaKnown RBP6.73□□□□□ -1.33
VPS11-209ENST00000622309 OR5A2Q8NGI9 324 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 NEUROG1Q92886 237 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 OR2V2Q96R30 315 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 FAM206AQ9NX38 181 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 DEC1Q9P2X7 70 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 RARRES3Q9UL19 164 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 SLC22A20A6NK97 555 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 ZNF207O43670 478 aaKnown RBP6.73□□□□□ -1.33
VPS11-209ENST00000622309 NDUFB4O95168 129 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 UTS2O95399 124 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 CRYAAP02489 173 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 VDAC1P21796 283 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 CA7P43166 264 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 FABP6P51161 128 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 MFAP4P55083 255 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 RPS18P62269 152 aaKnown RBP6.73□□□□□ -1.33
VPS11-209ENST00000622309 EGR4Q05215 589 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 MGAT2Q10469 447 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 LRRC75BQ2VPJ9 315 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 C9orf135Q5VTT2 229 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 NEGR1Q7Z3B1 354 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 RCHY1Q96PM5 261 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 TRPM6Q9BX84 2022 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 LAMA1P25391 3075 aa6.73□□□□□ -1.33
VPS11-209ENST00000622309 BRWD1Q9NSI6 2320 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.72□□□□□ -1.33
VPS11-209ENST00000622309 C3orf80F5H4A9 247 aa6.72□□□□□ -1.33
VPS11-209ENST00000622309 H0YJW9 148 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 408.1 ms