RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 MED6O75586 246 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 CNTFRP26992 372 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 FGF8P55075 233 aaPredicted RBP8.67□□□□□ -1.02
VPS11-208ENST00000621676 C17orf58Q2M2W7 97 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 TCF23Q7RTU1 214 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 S1PR3Q99500 378 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 RIMS4Q9H426 269 aaPredicted RBP8.67□□□□□ -1.02
VPS11-208ENST00000621676 WFDC1Q9HC57 220 aa8.67□□□□□ -1.02
VPS11-208ENST00000621676 SETXQ7Z333 2677 aaKnown RBP8.66□□□□□ -1.02
VPS11-208ENST00000621676 SHOXO15266 292 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 APOC3P02656 99 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 GZMHP20718 246 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 DYNLT3P51808 116 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 SRSF3P84103 164 aaKnown RBP8.66□□□□□ -1.02
VPS11-208ENST00000621676 RHOVQ96L33 236 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 GON7Q9BXV9 100 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 HEYLQ9NQ87 328 aaPredicted RBP8.66□□□□□ -1.02
VPS11-208ENST00000621676 JKAMPQ9P055 326 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 IGHV3OR16-8A0A075B7F1 116 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 IGHV3-35A0A0C4DH35 117 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 IGSF23A1L1A6 192 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 CTXN2P0C2S0 81 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 HKR1P10072 659 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 BRWD1-AS2P59051 145 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 GNB2P62879 340 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 FGL1Q08830 312 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 MZT1Q08AG7 82 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 STUMQ69YW2 141 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 ZNF788Q6ZQV5 615 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 THNSL2Q86YJ6 484 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 LILRB2Q8N423 598 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 OR10W1Q8NGF6 305 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 OR1S2Q8NGQ3 325 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 QTRT1Q9BXR0 403 aaKnown RBP8.66□□□□□ -1.02
VPS11-208ENST00000621676 GSX2Q9BZM3 304 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 TLNRD1Q9H1K6 362 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 SLA2Q9H6Q3 261 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 HES4Q9HCC6 221 aa8.66□□□□□ -1.02
VPS11-208ENST00000621676 MARCH11A6NNE9 402 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 B9A039 149 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 HSPB1P04792 205 aaKnown RBP8.65□□□□□ -1.02
VPS11-208ENST00000621676 IFNA4P05014 189 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 OR9G9P0C7N8 305 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 PLGLAQ15195 96 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 HIST2H2BDQ6DRA6 164 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 SLC35E4Q6ICL7 350 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 FAM213BQ8TBF2 198 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 R3HDM4Q96D70 268 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 ZNF714Q96N38 554 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 ARPC5LQ9BPX5 153 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 C20orf24Q9BUV8 137 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 MRPL20Q9BYC9 149 aaKnown RBP8.65□□□□□ -1.02
VPS11-208ENST00000621676 ZNF469Q96JG9 3925 aaPredicted RBP8.65□□□□□ -1.02
VPS11-208ENST00000621676 NIPBLQ6KC79 2804 aaeCLIP8.65□□□□□ -1.02
VPS11-208ENST00000621676 PPIAL4CA0A0B4J2A2 164 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 KBTBD11-OT1A0A1B0GTJ5 212 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 C15orf65H3BRN8 121 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 PPIAL4GP0DN37 164 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 VDAC1P21796 283 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 HCP5Q6MZN7 132 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 KCNRGQ8N5I3 272 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 Q8NFD4 153 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 DUX5Q96PT3 197 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 NUDT16L1Q9BRJ7 211 aaKnown RBP8.65□□□□□ -1.02
VPS11-208ENST00000621676 TMEM204Q9BSN7 226 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 MBNL3Q9NUK0 354 aaKnown RBP8.65□□□□□ -1.02
VPS11-208ENST00000621676 PSENENQ9NZ42 101 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 LINC00527Q9UJ94 153 aa8.65□□□□□ -1.02
VPS11-208ENST00000621676 UBR5O95071 2799 aaPredicted RBP8.65□□□□□ -1.03
VPS11-208ENST00000621676 UBE2L5PA0A1B0GUS4 154 aa8.65□□□□□ -1.03
VPS11-208ENST00000621676 hADV38S2A0JD32 116 aa8.65□□□□□ -1.03
VPS11-208ENST00000621676 CDS2O95674 445 aa8.65□□□□□ -1.03
VPS11-208ENST00000621676 LHBP01229 141 aa8.65□□□□□ -1.03
VPS11-208ENST00000621676 ACAA1P09110 424 aaPredicted RBP8.65□□□□□ -1.03
VPS11-208ENST00000621676 MECP2P51608 486 aaKnown RBP8.65□□□□□ -1.03
VPS11-208ENST00000621676 KRTAP10-9P60411 292 aa8.65□□□□□ -1.03
VPS11-208ENST00000621676 CYCSP99999 105 aaKnown RBP8.65□□□□□ -1.03
VPS11-208ENST00000621676 DHODHQ02127 395 aa8.65□□□□□ -1.03
VPS11-208ENST00000621676 KIAA0141Q14154 515 aaPredicted RBP8.65□□□□□ -1.03
VPS11-208ENST00000621676 LPCAT3Q6P1A2 487 aa8.65□□□□□ -1.03
VPS11-208ENST00000621676 PRSS54Q6PEW0 395 aa8.65□□□□□ -1.03
VPS11-208ENST00000621676 BRD3OSQ6XYD6 125 aa8.65□□□□□ -1.03
VPS11-208ENST00000621676 OR2C3Q8N628 320 aa8.65□□□□□ -1.03
VPS11-208ENST00000621676 BOD1Q96IK1 185 aa8.65□□□□□ -1.03
VPS11-208ENST00000621676 AGMATQ9BSE5 352 aa8.65□□□□□ -1.03
VPS11-208ENST00000621676 RAB1BQ9H0U4 201 aa8.65□□□□□ -1.03
VPS11-208ENST00000621676 TREM1Q9NP99 234 aa8.65□□□□□ -1.03
VPS11-208ENST00000621676 OR6C3Q9NZP0 311 aa8.65□□□□□ -1.03
VPS11-208ENST00000621676 ANAPC10Q9UM13 185 aa8.65□□□□□ -1.03
VPS11-208ENST00000621676 CLEC18AA5D8T8 446 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 GATA2P23769 480 aaPredicted RBP8.64□□□□□ -1.03
VPS11-208ENST00000621676 ARL16Q0P5N6 197 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 NHLRC3Q5JS37 347 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 LCN15Q6UWW0 184 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 CLEC18CQ8NCF0 446 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 OR5T1Q8NG75 326 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 DHRS9Q9BPW9 319 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 TPSG1Q9NRR2 321 aa8.64□□□□□ -1.03
VPS11-208ENST00000621676 ZNF107Q9UII5 783 aaPredicted RBP8.64□□□□□ -1.03
VPS11-208ENST00000621676 SRRM4A7MD48 611 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms