RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 AIPO00170 330 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 NDUFA4O00483 81 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 DYNC1I1O14576 645 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 ST8SIA5O15466 376 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 SELENOFO60613 162 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 ZNF780AO75290 641 aaPredicted RBP1.64□□□□□ -2.15
CPNE3-211ENST00000621526 SC5DO75845 299 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 SULT1C4O75897 302 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 OR2J3O76001 311 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 DHFRP00374 187 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 IGLV2-23P01705 113 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 IGKV1-16P04430 117 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 OCM2P0CE71 109 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 OCMP0CE72 109 aaPredicted RBP1.64□□□□□ -2.15
CPNE3-211ENST00000621526 SAA2P0DJI9 122 aaPredicted RBP1.64□□□□□ -2.15
CPNE3-211ENST00000621526 MT1HL1P0DM35 61 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 CPEP16870 476 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 PTBP1P26599 531 aaKnown RBP eCLIP1.64□□□□□ -2.15
CPNE3-211ENST00000621526 HCCSP53701 268 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 KRTAP10-4P60372 401 aaPredicted RBP1.64□□□□□ -2.15
CPNE3-211ENST00000621526 NUTF2P61970 127 aaKnown RBP1.64□□□□□ -2.15
CPNE3-211ENST00000621526 DLK1P80370 383 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 RIPK1Q13546 671 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 TPBGQ13641 420 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 KISS1Q15726 138 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 ATP6AP1Q15904 470 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 MPV17LQ2QL34 196 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 TNFAIP8L3Q5GJ75 292 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 LELP1Q5T871 98 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 TMEM88Q6PEY1 159 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 SPSB3Q6PJ21 355 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 ZNF322Q6U7Q0 402 aaPredicted RBP1.64□□□□□ -2.15
CPNE3-211ENST00000621526 PLET1Q6UQ28 207 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 UNQ9165/PRO28630Q6UXU0 137 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 ZNF705AQ6ZN79 300 aaPredicted RBP1.64□□□□□ -2.15
CPNE3-211ENST00000621526 SSX7Q7RTT5 188 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 TMEM179BQ7Z7N9 219 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 TRPT1Q86TN4 253 aaKnown RBP1.64□□□□□ -2.15
CPNE3-211ENST00000621526 ZDHHC13Q8IUH4 622 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 STHQ8IWL8 128 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 CADM3Q8N126 398 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 OR2AK2Q8NG84 335 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 OR10V1Q8NGI7 309 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 OR5D14Q8NGL3 314 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 OR8D4Q8NGM9 314 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 NTN5Q8WTR8 489 aaPredicted RBP1.64□□□□□ -2.15
CPNE3-211ENST00000621526 CCDC107Q8WV48 283 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 TMEM190Q8WZ59 177 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 PTX4Q96A99 478 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 EEF1AKMT3Q96AZ1 226 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 FGGYQ96C11 551 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 PELI1Q96FA3 418 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 CPNE2Q96FN4 548 aaPredicted RBP1.64□□□□□ -2.15
CPNE3-211ENST00000621526 PYURFQ96I23 114 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 CMTM3Q96MX0 182 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 C7orf26Q96N11 449 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 FANCD2OSQ96PS1 177 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 OR2A7Q96R45 310 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 NR1H4Q96RI1 486 aaPredicted RBP1.64□□□□□ -2.15
CPNE3-211ENST00000621526 APOL4Q9BPW4 351 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 HOPXQ9BPY8 73 aaPredicted RBP1.64□□□□□ -2.15
CPNE3-211ENST00000621526 GORASP2Q9H8Y8 452 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 TAF9BQ9HBM6 251 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 PAK1IP1Q9NWT1 392 aaPredicted RBP1.64□□□□□ -2.15
CPNE3-211ENST00000621526 IL36GQ9NZH8 169 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 THYN1Q9P016 225 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 GHRLQ9UBU3 117 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 AASSQ9UDR5 926 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 STEAP1Q9UHE8 339 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 ZNF257Q9Y2Q1 563 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 TNXBP22105 4242 aa1.64□□□□□ -2.15
CPNE3-211ENST00000621526 TRAV3A0A0B4J244 114 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 METTL15A6NJ78 407 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 SRRM4A7MD48 611 aaKnown RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 BBIP1A8MTZ0 92 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 ZNF705FA8MVS1 300 aaPredicted RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 H3BNX3 289 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 HSPB6O14558 160 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 CHEK1O14757 476 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 GSTA4O15217 222 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 MPPED1O15442 326 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 RGS16O15492 202 aaPredicted RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 RS1O15537 224 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 CREBL2O60519 120 aaPredicted RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 OR7C1O76099 320 aaPredicted RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 PRH1P02810 166 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 SEMG1P04279 462 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 KRT8P05787 483 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 UBCP0CG48 685 aaKnown RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 ZNF705DP0CH99 300 aaPredicted RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 ZNF705BP0CI00 300 aaPredicted RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 RRASP10301 218 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 RCC1P18754 421 aaPredicted RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 SLC2A5P22732 501 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 FGF9P31371 208 aaPredicted RBP1.63□□□□□ -2.15
CPNE3-211ENST00000621526 CCR9P51686 369 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 DEFB131AP59861 70 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 CXCR4P61073 352 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 UBE2KP61086 200 aa1.63□□□□□ -2.15
CPNE3-211ENST00000621526 SNRPGP62308 76 aaKnown RBP1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms