RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ACTBP60709 375 aa11.36□□□□□ -0.59
CBWD3-217ENST00000621474 MRPS10P82664 201 aaKnown RBP11.36□□□□□ -0.59
CBWD3-217ENST00000621474 ZNF79Q15937 498 aa11.36□□□□□ -0.59
CBWD3-217ENST00000621474 FCAMRQ8WWV6 532 aa11.36□□□□□ -0.59
CBWD3-217ENST00000621474 WFDC12Q8WWY7 111 aa11.36□□□□□ -0.59
CBWD3-217ENST00000621474 FABP12A6NFH5 140 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 RBBP9O75884 186 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 CD3DP04234 171 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 FXYD4P59646 89 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 RPL30P62888 115 aaKnown RBP11.35□□□□□ -0.59
CBWD3-217ENST00000621474 VAX1Q5SQQ9 334 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 C12orf54Q6X4T0 127 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 OR4D10Q8NGI6 311 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 GPHA2Q96T91 129 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 ZNF2Q9BSG1 426 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-217ENST00000621474 TINAGL1Q9GZM7 467 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-217ENST00000621474 PRSS22Q9GZN4 317 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 CCL28Q9NRJ3 127 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 RABL2AQ9UBK7 228 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-217ENST00000621474 RABL2BQ9UNT1 228 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 WASHC3Q9Y3C0 194 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 M0QYG6 137 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 M0QZK8 103 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 GSTZ1O43708 216 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-217ENST00000621474 NDUFA3O95167 84 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 CD74P04233 296 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 MC5RP33032 325 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 BRWD1-AS2P59051 145 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 SRSF4Q08170 494 aaKnown RBP11.35□□□□□ -0.59
CBWD3-217ENST00000621474 MMDQ15546 238 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 ZNF818PQ6ZRF7 136 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 NPBQ8NG41 125 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 OR6Q1Q8NGQ2 317 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 OR2T6Q8NHC8 308 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 WIPF2Q8TF74 440 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-217ENST00000621474 SECTM1Q8WVN6 248 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 MOB3AQ96BX8 217 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 FXYD6Q9H0Q3 95 aa11.35□□□□□ -0.59
CBWD3-217ENST00000621474 TNCP24821 2201 aa11.34□□□□□ -0.59
CBWD3-217ENST00000621474 NCBP2LA6PVI3 153 aaKnown RBP11.34□□□□□ -0.59
CBWD3-217ENST00000621474 GNRHRP30968 328 aa11.34□□□□□ -0.59
CBWD3-217ENST00000621474 S100A5P33763 92 aa11.34□□□□□ -0.59
CBWD3-217ENST00000621474 ETV6P41212 452 aa11.34□□□□□ -0.59
CBWD3-217ENST00000621474 SSBP1Q04837 148 aaKnown RBP11.34□□□□□ -0.59
CBWD3-217ENST00000621474 AADACL3Q5VUY0 350 aa11.34□□□□□ -0.59
CBWD3-217ENST00000621474 TMEM17Q86X19 198 aa11.34□□□□□ -0.59
CBWD3-217ENST00000621474 PDPNQ86YL7 162 aa11.34□□□□□ -0.59
CBWD3-217ENST00000621474 OR8H1Q8NGG4 311 aa11.34□□□□□ -0.59
CBWD3-217ENST00000621474 WNT10AQ9GZT5 417 aa11.34□□□□□ -0.59
CBWD3-217ENST00000621474 LIN7CQ9NUP9 197 aaKnown RBP11.34□□□□□ -0.59
CBWD3-217ENST00000621474 LINC01548A6NM66 108 aa11.33□□□□□ -0.6
CBWD3-217ENST00000621474 H7C2Y5 167 aa11.33□□□□□ -0.6
CBWD3-217ENST00000621474 NBR2O15453 112 aa11.33□□□□□ -0.6
CBWD3-217ENST00000621474 SLC22A5O76082 557 aa11.33□□□□□ -0.6
CBWD3-217ENST00000621474 THBS3P49746 956 aa11.33□□□□□ -0.6
CBWD3-217ENST00000621474 MSMO1Q15800 293 aa11.33□□□□□ -0.6
CBWD3-217ENST00000621474 FAAP20Q6NZ36 180 aa11.33□□□□□ -0.6
CBWD3-217ENST00000621474 TMEM229BQ8NBD8 167 aa11.33□□□□□ -0.6
CBWD3-217ENST00000621474 OR6F1Q8NGZ6 308 aa11.33□□□□□ -0.6
CBWD3-217ENST00000621474 TRIM63Q969Q1 353 aa11.33□□□□□ -0.6
CBWD3-217ENST00000621474 HSPB9Q9BQS6 159 aa11.33□□□□□ -0.6
CBWD3-217ENST00000621474 ZNF747Q9BV97 191 aa11.33□□□□□ -0.6
CBWD3-217ENST00000621474 SLC5A7Q9GZV3 580 aa11.33□□□□□ -0.6
CBWD3-217ENST00000621474 SLC35D1Q9NTN3 355 aa11.33□□□□□ -0.6
CBWD3-217ENST00000621474 ZNF107Q9UII5 783 aaPredicted RBP11.33□□□□□ -0.6
CBWD3-217ENST00000621474 SRRM4A7MD48 611 aaKnown RBP11.32□□□□□ -0.6
CBWD3-217ENST00000621474 HAX1O00165 279 aa11.32□□□□□ -0.6
CBWD3-217ENST00000621474 TNFSF12O43508 249 aa11.32□□□□□ -0.6
CBWD3-217ENST00000621474 IGLV2-23P01705 113 aa11.32□□□□□ -0.6
CBWD3-217ENST00000621474 IGHG2P01859 326 aa11.32□□□□□ -0.6
CBWD3-217ENST00000621474 ZNF735P0CB33 412 aa11.32□□□□□ -0.6
CBWD3-217ENST00000621474 TBPP20226 339 aa11.32□□□□□ -0.6
CBWD3-217ENST00000621474 TAS2R19P59542 299 aa11.32□□□□□ -0.6
CBWD3-217ENST00000621474 ACTBL2Q562R1 376 aa11.32□□□□□ -0.6
CBWD3-217ENST00000621474 LHFPL1Q86WI0 220 aa11.32□□□□□ -0.6
CBWD3-217ENST00000621474 C3orf56Q8N813 242 aa11.32□□□□□ -0.6
CBWD3-217ENST00000621474 BVESQ8NE79 360 aa11.32□□□□□ -0.6
CBWD3-217ENST00000621474 TAS2R8Q9NYW2 309 aa11.32□□□□□ -0.6
CBWD3-217ENST00000621474 PEX14O75381 377 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 APOA2P02652 100 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 CNPY1Q3B7I2 92 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 RNASE10Q5GAN6 216 aaKnown RBP11.31□□□□□ -0.6
CBWD3-217ENST00000621474 STEAP1BQ6NZ63 245 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 KCTD9Q7L273 389 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 MFSD4AQ8N468 514 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 KLHDC1Q8N7A1 406 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 MRGPRFQ96AM1 343 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 ADTRPQ96IZ2 230 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 HSD17B10Q99714 261 aaKnown RBP11.31□□□□□ -0.6
CBWD3-217ENST00000621474 RNF5Q99942 180 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 CITED1Q99966 193 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 ANKRD20A5PA0PJZ0 165 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 PTBP1P26599 531 aaKnown RBP eCLIP11.31□□□□□ -0.6
CBWD3-217ENST00000621474 VDAC2P45880 294 aaPredicted RBP11.31□□□□□ -0.6
CBWD3-217ENST00000621474 HERV-K104P61576 105 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 TSPAN5P62079 268 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 C5orf64Q2M2E5 130 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 TMEM177Q53S58 311 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 C9orf152Q5JTZ5 239 aa11.31□□□□□ -0.6
CBWD3-217ENST00000621474 HIST2H2BDQ6DRA6 164 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms