RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 FAM90A24PP0C7X0 464 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 NPPCP23582 126 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 RELBQ01201 579 aa8.4□□□□□ -1.07
CLTCL1-211ENST00000621271 DUXBA0A1W2PPF3 345 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 CD1AP06126 327 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 CECR9P0C854 216 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 LIMS1P48059 325 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 TBR1Q16650 682 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 TOMM20LQ6UXN7 152 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 HOGA1Q86XE5 327 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 ZNF645Q8N7E2 425 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 MIEN1Q9BRT3 115 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 AP5S1Q9NUS5 200 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 DPM3Q9P2X0 92 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 JPT1Q9UK76 154 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 CGB1A6NKQ9 187 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 CFDP00746 253 aaPredicted RBP8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 SMIM10L1P0DMW3 83 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 TMEM50BP56557 158 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 HIST1H3AP68431 136 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 VAMP3Q15836 100 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 BPIFA4PQ86YQ2 179 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 GBGT1Q8N5D6 347 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 TMEM45BQ96B21 275 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 SMIM10Q96HG1 83 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 MEGF10Q96KG7 1140 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 WNT5BQ9H1J7 359 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 NPVFQ9HCQ7 196 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 CBLN4Q9NTU7 201 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 CHCHD2Q9Y6H1 151 aaPredicted RBP8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 CACNA1BQ00975 2339 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 ZG16O60844 167 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 GCM2O75603 506 aaPredicted RBP8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 CXorf1O96002 111 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 IGLV3-21P80748 117 aaPredicted RBP8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 ZNF660Q6AZW8 331 aaPredicted RBP8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 SLC35E3Q7Z769 313 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 SLC25A33Q9BSK2 321 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 AKIRIN1Q9H9L7 192 aaPredicted RBP8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 PRR13Q9NZ81 148 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 MED19A0JLT2 244 aaPredicted RBP8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 IGKV3-11P04433 115 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 NRN1LQ496H8 165 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 PRNTQ86SH4 94 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 MRPL24Q96A35 216 aaKnown RBP8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 VWCEQ96DN2 955 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 RCC2Q9P258 522 aaKnown RBP8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 OR10J1P30954 320 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 LYZL2Q7Z4W2 148 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 APCDD1LQ8NCL9 501 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 OR11H4Q8NGC9 324 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 SDHCQ99643 169 aaPredicted RBP8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 SOSTQ9BQB4 213 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 PRSS27Q9BQR3 290 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 LPAR5Q9H1C0 372 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 DCAF16Q9NXF7 216 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 DLL3Q9NYJ7 618 aa8.39□□□□□ -1.07
CLTCL1-211ENST00000621271 ARID1AO14497 2285 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 TMEM8BA6NDV4 472 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 HELTA6NFD8 242 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 ZNF708P17019 499 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 FCGR2BP31994 310 aaPredicted RBP8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 MAS1LP35410 378 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 TCL1AP56279 114 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 LINC00518Q8N0U6 118 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 KLHDC2Q9Y2U9 406 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 ATAD5Q96QE3 1844 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 RND2P52198 227 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 DLX1P56177 255 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 DSCR9P59020 149 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 CD81P60033 236 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 MRPL30Q8TCC3 161 aaKnown RBP8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 OR10C1Q96KK4 312 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 LINC00869P0C866 280 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 HIST1H1BP16401 226 aaKnown RBP8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 HNRNPA3P51991 378 aaKnown RBP8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 SUCLG1P53597 346 aaKnown RBP8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 PMS2P11Q13670 270 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 SNAI3Q3KNW1 292 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 PTX4Q96A99 478 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 GPX7Q96SL4 187 aaPredicted RBP8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 QTRT1Q9BXR0 403 aaKnown RBP8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 LYRM2Q9NU23 88 aaPredicted RBP8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM74A7A6NL05 159 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 B4DEV8 164 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 FAM74A3Q4VXF1 159 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 SCGB1D4Q6XE38 83 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 PUSL1Q8N0Z8 303 aaKnown RBP8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 LEAP2Q969E1 77 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 LSM10Q969L4 123 aaKnown RBP8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 PACRGQ96M98 296 aaPredicted RBP8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 NRIP2Q9BQI9 281 aa8.38□□□□□ -1.07
CLTCL1-211ENST00000621271 ACACAQ13085 2346 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 RPL29P47914 159 aaKnown RBP8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 NHLRC3Q5JS37 347 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 SAXO1Q8IYX7 474 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 ADAD2Q8NCV1 583 aaKnown RBP8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 OR10G8Q8NGN5 311 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 LHFPL6Q9Y693 200 aa8.37□□□□□ -1.07
CLTCL1-211ENST00000621271 M0R143 59 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms