RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 ABHD5Q8WTS1 349 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 MS4A10Q96PG2 267 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 Q9N2K0 584 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 PLEKHJ1Q9NW61 149 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 GAR1Q9NY12 217 aaKnown RBP8.81□□□□□ -1
CPNE3-210ENST00000621245 ABRACLQ9P1F3 81 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 STEAP1Q9UHE8 339 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 NUBP2Q9Y5Y2 271 aa8.81□□□□□ -1
CPNE3-210ENST00000621245 DNAH10Q8IVF4 4471 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 TRBV6-6A0A0A6YYG2 114 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 OR5H14A6NHG9 310 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 H3BS24 57 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 H7C2Y5 167 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 SLC17A2O00624 439 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 RAB29O14966 203 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 SAP30O75446 220 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 LGALS1P09382 135 aaKnown RBP8.8□□□□□ -1
CPNE3-210ENST00000621245 NHLRC4P0CG21 123 aaPredicted RBP8.8□□□□□ -1
CPNE3-210ENST00000621245 VEGFCP49767 419 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 DCTN2Q13561 401 aaKnown RBP8.8□□□□□ -1
CPNE3-210ENST00000621245 PSG5Q15238 335 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 MOGAT2Q3SYC2 334 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 ZNF660Q6AZW8 331 aaPredicted RBP8.8□□□□□ -1
CPNE3-210ENST00000621245 PPP1R27Q86WC6 154 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 FAM89BQ8N5H3 189 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 MS4A15Q8N5U1 240 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 OR5AN1Q8NGI8 311 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 THRSPQ92748 146 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 PECRQ9BY49 303 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 PIPOXQ9P0Z9 390 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 METTL1Q9UBP6 276 aaKnown RBP8.8□□□□□ -1
CPNE3-210ENST00000621245 WASHC3Q9Y3C0 194 aa8.8□□□□□ -1
CPNE3-210ENST00000621245 LINC01619G3V211 115 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 LDLRAD4O15165 306 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 HSMCR30P0CW71 290 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 CEACAM6P40199 344 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 OR10A3P58181 314 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 FABP5Q01469 135 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 PJVKQ0ZLH3 352 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 PLGLAQ15195 96 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 CD200R1LQ6Q8B3 271 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 UNQ5815/PRO19632Q6UWF5 114 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 MOB1BQ7L9L4 216 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 LFNGQ8NES3 379 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 MAFIPQ8WZ33 124 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 UFD1Q92890 307 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 CHCHD6Q9BRQ6 235 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 PLGRKTQ9HBL7 147 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 ZMAT5Q9UDW3 170 aaKnown RBP8.79□□□□□ -1
CPNE3-210ENST00000621245 KCNK7Q9Y2U2 307 aa8.79□□□□□ -1
CPNE3-210ENST00000621245 A0A0B4J203 849 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 TMEM272A0A1B0GTI8 110 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 ITGB1BP1O14713 200 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 SLC25A17O43808 307 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 RBMXL2O75526 392 aaKnown RBP8.78□□□□□ -1
CPNE3-210ENST00000621245 IGLV2-23P01705 113 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 FRMD6-AS1P0C7T7 363 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 ARSBP15848 533 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 CALRP27797 417 aaKnown RBP8.78□□□□□ -1
CPNE3-210ENST00000621245 TPPP2P59282 170 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 TPBGQ13641 420 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 RAB11BQ15907 218 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 MRGPRG-AS1Q2M3A8 158 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 ACTBL2Q562R1 376 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 IGSF11Q5DX21 431 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 HES5Q5TA89 166 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 ACSM6Q6P461 480 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 GRPEL2Q8TAA5 225 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 CDIP1Q9H305 208 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 DUSP21Q9H596 190 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 C12orf4Q9NQ89 552 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 RDH8Q9NYR8 311 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 LRRC42Q9Y546 428 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 SMAD5-AS1Q9Y6J3 95 aa8.78□□□□□ -1
CPNE3-210ENST00000621245 KMT2AQ03164 3969 aa8.77□□□□□ -1.01
CPNE3-210ENST00000621245 M0R1X1 148 aa8.77□□□□□ -1.01
CPNE3-210ENST00000621245 HSPA12AO43301 675 aa8.77□□□□□ -1.01
CPNE3-210ENST00000621245 TRBV12-3P01733 135 aa8.77□□□□□ -1.01
CPNE3-210ENST00000621245 APELAP0DMC3 54 aa8.77□□□□□ -1.01
CPNE3-210ENST00000621245 GP9P14770 177 aa8.77□□□□□ -1.01
CPNE3-210ENST00000621245 ZBTB25P24278 435 aa8.77□□□□□ -1.01
CPNE3-210ENST00000621245 SSX1Q16384 188 aa8.77□□□□□ -1.01
CPNE3-210ENST00000621245 SRSF7Q16629 238 aaKnown RBP eCLIP8.77□□□□□ -1.01
CPNE3-210ENST00000621245 C2orf76Q3KRA6 126 aa8.77□□□□□ -1.01
CPNE3-210ENST00000621245 ZNF429Q86V71 674 aa8.77□□□□□ -1.01
CPNE3-210ENST00000621245 PTX4Q96A99 478 aa8.77□□□□□ -1.01
CPNE3-210ENST00000621245 FAM3DQ96BQ1 224 aa8.77□□□□□ -1.01
CPNE3-210ENST00000621245 RCHY1Q96PM5 261 aa8.77□□□□□ -1.01
CPNE3-210ENST00000621245 CMSS1Q9BQ75 279 aaKnown RBP8.77□□□□□ -1.01
CPNE3-210ENST00000621245 ZNF230Q9UIE0 474 aaPredicted RBP8.77□□□□□ -1.01
CPNE3-210ENST00000621245 ELF5Q9UKW6 265 aaPredicted RBP8.77□□□□□ -1.01
CPNE3-210ENST00000621245 HSF4Q9ULV5 492 aa8.77□□□□□ -1.01
CPNE3-210ENST00000621245 DNAH6Q9C0G6 4158 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 VPS13DQ5THJ4 4388 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 IGKV1D-8A0A087WSZ0 117 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 SRRM4A7MD48 611 aaKnown RBP8.76□□□□□ -1.01
CPNE3-210ENST00000621245 TRDCB7Z8K6 153 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 TRGV3P03979 118 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 CRYGBP07316 175 aa8.76□□□□□ -1.01
CPNE3-210ENST00000621245 FCGR3AP08637 254 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms