RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 PKIBQ9C010 78 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 MFFQ9GZY8 342 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 FXYD6Q9H0Q3 95 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 CST11Q9H112 138 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 TMEM138Q9NPI0 162 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 GLS2Q9UI32 602 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 STAB2Q8WWQ8 2551 aa6.21□□□□□ -1.42
CLK1-215ENST00000621181 TRBV6-7A0A0A0MS04 114 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 A0A0D9SG52 128 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 C9orf170A2RU37 121 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 OR5H14A6NHG9 310 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 FOXI3A8MTJ6 420 aaPredicted RBP6.2□□□□□ -1.42
CLK1-215ENST00000621181 MMP23AO75900 390 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 HAND1O96004 215 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 RLN2P04090 185 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 AMY1AP04745 511 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 TBPP20226 339 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 CEACAM3P40198 252 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 RPL23AP62750 156 aaKnown RBP6.2□□□□□ -1.42
CLK1-215ENST00000621181 CDNFQ49AH0 187 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 OR52W1Q6IF63 320 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 Q6ZSR3 168 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 C8orf86Q6ZUL3 223 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 OR2W3Q7Z3T1 314 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 STPG2Q8N412 459 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 GVQW1Q8N7I0 195 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 KLHL30-AS1Q8NEE0 82 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 COQ8AQ8NI60 647 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 ST8SIA2Q92186 375 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 EMG1Q92979 244 aaKnown RBP6.2□□□□□ -1.42
CLK1-215ENST00000621181 FAM46BQ96A09 425 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 SLAMF9Q96A28 289 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 PRRT1Q99946 306 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 LPAR5Q9H1C0 372 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 SLC25A32Q9H2D1 315 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 GAL3ST2Q9H3Q3 398 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 MOB1AQ9H8S9 216 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 MTCH1Q9NZJ7 389 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 SLC7A11Q9UPY5 501 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 KCNK7Q9Y2U2 307 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 METTL21EPA6NDL7 271 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 DHRS7CA6NNS2 312 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 DISC1C4P0D8 188 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 KRBOX1C9JBD0 128 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 F8VVB4 439 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 F8VWA3 439 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 SYT7O43581 403 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 PSPNO60542 156 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 RAMP3O60896 148 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 UBBP0CG47 229 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 FAM106CPP0CH98 169 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 CD34P28906 385 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 NUP62P37198 522 aaPredicted RBP6.2□□□□□ -1.42
CLK1-215ENST00000621181 OR3A4PP47883 348 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 TMEM50BP56557 158 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 RPS27AP62979 156 aaKnown RBP6.2□□□□□ -1.42
CLK1-215ENST00000621181 TAGLNQ01995 201 aaKnown RBP6.2□□□□□ -1.42
CLK1-215ENST00000621181 TNP2Q05952 138 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 PPP1R1AQ13522 171 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 OR2F1Q13607 317 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 RBM39Q14498 530 aaKnown RBP6.2□□□□□ -1.42
CLK1-215ENST00000621181 PLAC9Q5JTB6 97 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 PRAMEF5Q5TYX0 476 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 CCDC144NLQ6NUI1 221 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 SLC25A26Q70HW3 274 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 TMED4Q7Z7H5 227 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 HOGA1Q86XE5 327 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 OR10R2Q8NGX6 335 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 NUDCD2Q8WVJ2 157 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 MRPS24Q96EL2 167 aaKnown RBP6.2□□□□□ -1.42
CLK1-215ENST00000621181 CYYR1Q96J86 154 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 UBE2J1Q9Y385 318 aaPredicted RBP6.2□□□□□ -1.42
CLK1-215ENST00000621181 V9GYS6 101 aa6.2□□□□□ -1.42
CLK1-215ENST00000621181 TENM2Q9NT68 2774 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 TRGV10A0A0A0MS01 117 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 TOR1AO14656 332 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 MGST3O14880 152 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 SCGNO76038 276 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 GNB3P16520 340 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 RAB3AP20336 220 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 DUSP1P28562 367 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 MYCNOSP40205 109 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 FGL1Q08830 312 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 RNASE10Q5GAN6 216 aaKnown RBP6.19□□□□□ -1.42
CLK1-215ENST00000621181 HEPN1Q6WQI6 88 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 C18orf65Q6ZTR6 163 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 ZNF546Q86UE3 836 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 Q8IYB0 196 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 FAM89BQ8N5H3 189 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 ADAD2Q8NCV1 583 aaKnown RBP6.19□□□□□ -1.42
CLK1-215ENST00000621181 TMEM104Q8NE00 496 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 OR5D14Q8NGL3 314 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 OR13C9Q8NGT0 318 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 OR14K1Q8NGZ2 314 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 LHFPL5Q8TAF8 219 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 NOL4LQ96MY1 436 aaPredicted RBP6.19□□□□□ -1.42
CLK1-215ENST00000621181 DUX3Q96PT4 197 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 SELENOIQ9C0D9 397 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 IL36RNQ9UBH0 155 aa6.19□□□□□ -1.42
CLK1-215ENST00000621181 MOB4Q9Y3A3 225 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms