RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ZNF808Q8N4W9 903 aaPredicted RBP16.42■□□□□ 0.22
PDLIM3-212ENST00000620787 Q8N7P7 452 aa16.42■□□□□ 0.22
PDLIM3-212ENST00000620787 ZNF709Q8N972 641 aa16.42■□□□□ 0.22
PDLIM3-212ENST00000620787 SNHG12Q9BXW3 62 aa16.42■□□□□ 0.22
PDLIM3-212ENST00000620787 GP6Q9HCN6 339 aa16.42■□□□□ 0.22
PDLIM3-212ENST00000620787 TMPRSS2O15393 492 aa16.41■□□□□ 0.22
PDLIM3-212ENST00000620787 CRYAAP02489 173 aa16.41■□□□□ 0.22
PDLIM3-212ENST00000620787 EGR1P18146 543 aa16.41■□□□□ 0.22
PDLIM3-212ENST00000620787 PPP1CBP62140 327 aa16.41■□□□□ 0.22
PDLIM3-212ENST00000620787 ZNF146Q15072 292 aa16.41■□□□□ 0.22
PDLIM3-212ENST00000620787 DIRC2Q96SL1 478 aa16.41■□□□□ 0.22
PDLIM3-212ENST00000620787 AURKAIP1Q9NWT8 199 aaPredicted RBP16.41■□□□□ 0.22
PDLIM3-212ENST00000620787 FKBP11Q9NYL4 201 aa16.41■□□□□ 0.22
PDLIM3-212ENST00000620787 C17orf98A8MV24 154 aa16.41■□□□□ 0.22
PDLIM3-212ENST00000620787 PMS2CLQ68D20 193 aa16.41■□□□□ 0.22
PDLIM3-212ENST00000620787 FAM173AQ9BQD7 235 aa16.41■□□□□ 0.22
PDLIM3-212ENST00000620787 TRAPPC1Q9Y5R8 145 aa16.41■□□□□ 0.22
PDLIM3-212ENST00000620787 PXMP4Q9Y6I8 212 aa16.41■□□□□ 0.22
PDLIM3-212ENST00000620787 A0A0U1RQK1 487 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 A0A1B0GUS0 222 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 ZNF320A2RRD8 509 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 NXPH2O95156 264 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 ATP5G3P48201 142 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 WDYHV1Q96HA8 205 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 HES7Q9BYE0 225 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 POLDIP2Q9Y2S7 368 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 POLR3KQ9Y2Y1 108 aaPredicted RBP16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 C17orf112F2Z3M2 114 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 SH2D1BO14796 132 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 PDE6DO43924 150 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 NEURL1O76050 574 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 PDGFBP01127 241 aaPredicted RBP16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 CFIP05156 583 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 OR3A1P47881 315 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 SPINK9Q5DT21 86 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 TMEM256Q8N2U0 113 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 CIB3Q96Q77 187 aaPredicted RBP16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 ATG101Q9BSB4 218 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 DERL1Q9BUN8 251 aa16.4■□□□□ 0.22
PDLIM3-212ENST00000620787 DNAJC13O75165 2243 aa16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 KIR2DL5BA0A0G2JN68 375 aa16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 KIR2DL5BA0A0G2JPC4 375 aa16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 RAB29O14966 203 aa16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 CLDN14O95500 239 aa16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 SCGB1D1O95968 90 aa16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 C1QTNF9P0C862 333 aa16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 BMP5P22003 454 aa16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 CEBPDP49716 269 aaPredicted RBP16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 ERVFC1-1P60608 527 aa16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 C1orf194Q5T5A4 169 aa16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 KIR2DL5AQ8N109 375 aa16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 ZNF114Q8NC26 417 aa16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 OR52L2PQ8NGH6 319 aa16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 CT55Q8WUE5 264 aa16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 IMMP2LQ96T52 175 aa16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 CBLN4Q9NTU7 201 aa16.39■□□□□ 0.21
PDLIM3-212ENST00000620787 FAM166BA8MTA8 275 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 C12orf77C9JDV5 145 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 NUPR1O60356 82 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 RAC2P15153 192 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 UBE2G2P60604 165 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 CATR1Q13166 79 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 GCSAMLQ5JQS6 135 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 MDP1Q86V88 176 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 KCNIP1Q9NZI2 227 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 PTPRBP23467 1997 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 CDIPTO14735 213 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 PSPNO60542 156 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 NDUFB4O95168 129 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 CD82P27701 267 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 MAGEA5P43359 124 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 FOXL1Q12952 345 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 SSPNQ14714 243 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 GALMQ96C23 342 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 KCNIP2Q9NS61 270 aa16.38■□□□□ 0.21
PDLIM3-212ENST00000620787 TRAV38-1A0A0B4J264 116 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 IGHV3-64DA0A0J9YX35 117 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 PGPEP1LA6NFU8 196 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 GCH1P30793 250 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 C3AR1Q16581 482 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 TMEM249Q2WGJ8 235 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 BTNL3Q6UXE8 466 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 THOC3Q96J01 351 aaKnown RBP16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 BTF3L4Q96K17 158 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 ELOVL5Q9NYP7 299 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 B4GALT7Q9UBV7 327 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 NAGKQ9UJ70 344 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 TMEM30CPA0ZSE6 113 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 C15orf62A8K5M9 175 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 HAND1O96004 215 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 CST9LP1Q5W188 147 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 H2BFWTQ7Z2G1 175 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 TIPARPQ7Z3E1 657 aaKnown RBP16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 HLA-CQ95604 372 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 WDR83OSQ9Y284 106 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 VPS13AQ96RL7 3174 aa16.37■□□□□ 0.21
PDLIM3-212ENST00000620787 RBFOX2O43251 390 aaKnown RBP eCLIP16.36■□□□□ 0.21
PDLIM3-212ENST00000620787 RAB1CQ92928 201 aa16.36■□□□□ 0.21
PDLIM3-212ENST00000620787 COL27A1Q8IZC6 1860 aaPredicted RBP16.36■□□□□ 0.21
PDLIM3-212ENST00000620787 TMEM210A6NLX4 147 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms