RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	TMEM9B	Q9NQ34	198 aa		12.21	□□□□□ -0.45
SMTN-223	ENST00000619644	LIN7C	Q9NUP9	197 aa	Known RBP	12.21	□□□□□ -0.45
SMTN-223	ENST00000619644	CBY1	Q9Y3M2	126 aa		12.21	□□□□□ -0.45
SMTN-223	ENST00000619644	RAMP3	O60896	148 aa		12.21	□□□□□ -0.46
SMTN-223	ENST00000619644	MEF2B	Q02080	365 aa	Predicted RBP	12.21	□□□□□ -0.46
SMTN-223	ENST00000619644	HAPLN4	Q86UW8	402 aa		12.21	□□□□□ -0.46
SMTN-223	ENST00000619644	DRAM1	Q8N682	238 aa		12.21	□□□□□ -0.46
SMTN-223	ENST00000619644		Q8NFD4	153 aa		12.21	□□□□□ -0.46
SMTN-223	ENST00000619644	RFESD	Q8TAC1	157 aa		12.21	□□□□□ -0.46
SMTN-223	ENST00000619644	IL22RA2	Q969J5	263 aa		12.21	□□□□□ -0.46
SMTN-223	ENST00000619644	OR51I2	Q9H344	312 aa		12.21	□□□□□ -0.46
SMTN-223	ENST00000619644	OBP2B	Q9NPH6	170 aa		12.21	□□□□□ -0.46
SMTN-223	ENST00000619644	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	12.21	□□□□□ -0.46
SMTN-223	ENST00000619644	FOXJ2	Q9P0K8	574 aa		12.21	□□□□□ -0.46
SMTN-223	ENST00000619644	MPC1	Q9Y5U8	109 aa		12.21	□□□□□ -0.46
SMTN-223	ENST00000619644	IGHV3-43	A0A0B4J1X8	118 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	OR5B21	A6NL26	309 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	DEFB108A	A8MXU0	73 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	RPLP1	P05386	114 aa	Known RBP	12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	IGHV3-43D	P0DP04	118 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	OR3A1	P47881	315 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	LINC00205	P59089	165 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	LRP11	Q86VZ4	500 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	SCCPDH	Q8NBX0	429 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	PSMG3	Q9BT73	122 aa	Predicted RBP	12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	FZR1	Q9UM11	496 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	TMEM41B	Q5BJD5	291 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	ZNF705A	Q6ZN79	300 aa	Predicted RBP	12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	ZNF826P	Q6ZT77	177 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	CENPV	Q7Z7K6	275 aa	Predicted RBP	12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	OR4F5	Q8NH21	305 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	GATAD1	Q8WUU5	269 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	OR4F4	Q96R69	305 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	RTL8A	Q9BWD3	113 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	LINC00470	Q9BZP3	86 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	STRADB	Q9C0K7	418 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	FAM234A	Q9H0X4	552 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	OR6C3	Q9NZP0	311 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	NAGK	Q9UJ70	344 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	TNRC18	O15417	2968 aa	Predicted RBP	12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	IGKV3D-15	A0A087WSY6	115 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	LYZL6	O75951	148 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	GABRA2	P47869	451 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	CNN1	P51911	297 aa	Known RBP	12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	ZNF585B	Q52M93	769 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	OR2T10	Q8NGZ9	312 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	OR1L1	Q8NH94	360 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	PARL	Q9H300	379 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644	KCNIP1	Q9NZI2	227 aa		12.2	□□□□□ -0.46
SMTN-223	ENST00000619644		J3QT63	122 aa		12.19	□□□□□ -0.46
SMTN-223	ENST00000619644	IGHV3-13	P01766	116 aa		12.19	□□□□□ -0.46
SMTN-223	ENST00000619644	IGHV3-7	P01780	117 aa		12.19	□□□□□ -0.46
SMTN-223	ENST00000619644	RAC2	P15153	192 aa		12.19	□□□□□ -0.46
SMTN-223	ENST00000619644	MEOX1	P50221	254 aa		12.19	□□□□□ -0.46
SMTN-223	ENST00000619644	OR52L2P	Q8NGH6	319 aa		12.19	□□□□□ -0.46
SMTN-223	ENST00000619644	TAF15	Q92804	592 aa	Known RBP eCLIP	12.19	□□□□□ -0.46
SMTN-223	ENST00000619644	NINJ1	Q92982	152 aa		12.19	□□□□□ -0.46
SMTN-223	ENST00000619644		A0A1B0GUS0	222 aa		12.19	□□□□□ -0.46
SMTN-223	ENST00000619644	WNT9B	O14905	357 aa		12.19	□□□□□ -0.46
SMTN-223	ENST00000619644	AES	Q08117	197 aa		12.19	□□□□□ -0.46
SMTN-223	ENST00000619644	WDR61	Q9GZS3	305 aa	Known RBP	12.19	□□□□□ -0.46
SMTN-223	ENST00000619644	ARG2	P78540	354 aa		12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	SERF2	P84101	59 aa		12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	LRRC75B	Q2VPJ9	315 aa		12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	ZDHHC16	Q969W1	377 aa		12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	LRP5L	A4QPB2	252 aa		12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	ZNF705F	A8MVS1	300 aa	Predicted RBP	12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	SH2D1B	O14796	132 aa		12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	GGCT	O75223	188 aa	Known RBP	12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	ZNF705D	P0CH99	300 aa	Predicted RBP	12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	ZNF705B	P0CI00	300 aa	Predicted RBP	12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	PCP4	P48539	62 aa		12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	UBE2N	P61088	152 aa	Known RBP	12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	TBC1D28	Q2M2D7	210 aa		12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	ACSF3	Q4G176	576 aa	Predicted RBP	12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	ATP1A1-AS1	Q5TC04	95 aa		12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	TMPRSS7	Q7RTY8	843 aa		12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	CISD2	Q8N5K1	135 aa	Known RBP	12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	MRGPRD	Q8TDS7	321 aa		12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	SDSL	Q96GA7	329 aa		12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	IGLV2-14	P01704	120 aa		12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	SRSF7	Q16629	238 aa	Known RBP eCLIP	12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	NRN1L	Q496H8	165 aa		12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	TMEM256	Q8N2U0	113 aa		12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	RPP25L	Q8N5L8	163 aa	Known RBP	12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	ZNF709	Q8N972	641 aa		12.18	□□□□□ -0.46
SMTN-223	ENST00000619644	CEP250	Q9BV73	2442 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644		M0QZK8	103 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	GALR2	O43603	387 aa	Predicted RBP	12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	IGKV1D-33	P01593	117 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	IGKV1-33	P01594	117 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	OR10J1	P30954	320 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	PSMB3	P49720	205 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	UBE2G2	P60604	165 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	RNPS1	Q15287	305 aa	Known RBP	12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	TMEM164	Q5U3C3	297 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	WDR86	Q86TI4	376 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	C9orf172	C9J069	976 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	HPRT1	P00492	218 aa		12.17	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms