RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 CCL2P13500 99 aa12.33□□□□□ -0.43
SYNRG-225ENST00000619541 UBE2V1Q13404 147 aa12.33□□□□□ -0.43
SYNRG-225ENST00000619541 HLA-DRB5Q30154 266 aa12.33□□□□□ -0.43
SYNRG-225ENST00000619541 SAXO1Q8IYX7 474 aa12.33□□□□□ -0.43
SYNRG-225ENST00000619541 C10orf35Q96D05 121 aa12.33□□□□□ -0.43
SYNRG-225ENST00000619541 RNF2Q99496 336 aa12.33□□□□□ -0.43
SYNRG-225ENST00000619541 NRN1Q9NPD7 142 aa12.33□□□□□ -0.43
SYNRG-225ENST00000619541 FGF21Q9NSA1 209 aa12.33□□□□□ -0.43
SYNRG-225ENST00000619541 OR6C6A6NF89 314 aa12.33□□□□□ -0.44
SYNRG-225ENST00000619541 ZNF253O75346 499 aa12.33□□□□□ -0.44
SYNRG-225ENST00000619541 IGKV1-5P01602 117 aa12.33□□□□□ -0.44
SYNRG-225ENST00000619541 SUMO3P55854 103 aaPredicted RBP12.33□□□□□ -0.44
SYNRG-225ENST00000619541 LCN12Q6JVE5 192 aa12.33□□□□□ -0.44
SYNRG-225ENST00000619541 OR2W1Q9Y3N9 320 aa12.33□□□□□ -0.44
SYNRG-225ENST00000619541 TRAPPC2LH3BP13 241 aa12.33□□□□□ -0.44
SYNRG-225ENST00000619541 ITGB1BP1O14713 200 aa12.33□□□□□ -0.44
SYNRG-225ENST00000619541 CENPVQ7Z7K6 275 aaPredicted RBP12.33□□□□□ -0.44
SYNRG-225ENST00000619541 MRPL52Q86TS9 123 aaKnown RBP12.33□□□□□ -0.44
SYNRG-225ENST00000619541 NXPH2O95156 264 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 IGKV1-39P01597 117 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 IGKV1D-39P04432 117 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 KRTCAP3Q53RY4 240 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 ZNF808Q8N4W9 903 aaPredicted RBP12.32□□□□□ -0.44
SYNRG-225ENST00000619541 CHRNA10Q9GZZ6 450 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 HIPK2Q9H2X6 1198 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 FER1L5A0AVI2 2057 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 YPEL1O60688 119 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 WNT2P09544 360 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 LDLRAD2Q5SZI1 272 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 GUSBP11Q6P575 273 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 MKXQ8IYA7 352 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 OR8I2Q8N0Y5 310 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 ZNF596Q8TC21 504 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 NABP1Q96AH0 204 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 BORCS7Q96B45 105 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 YPEL2Q96QA6 119 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 LRFN3Q9BTN0 628 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 SELENOKQ9Y6D0 94 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 AARDQ4LEZ3 155 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 FBLN7Q53RD9 439 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 C20orf204Q6ZNR8 217 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 C1orf174Q8IYL3 243 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 FAM58AQ8N1B3 248 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 APOBEC3DQ96AK3 386 aaPredicted RBP12.32□□□□□ -0.44
SYNRG-225ENST00000619541 UHRF2Q96PU4 802 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 GNB4Q9HAV0 340 aa12.32□□□□□ -0.44
SYNRG-225ENST00000619541 G6PCP35575 357 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 LHX2P50458 406 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 LINC00310P59036 64 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 OR1L1Q8NH94 360 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 MAFAQ8NHW3 353 aaPredicted RBP12.31□□□□□ -0.44
SYNRG-225ENST00000619541 OCC1Q8TAD7 63 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 ST6GALNAC6Q969X2 333 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 R4GN57 208 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 A0A1B0GX78 115 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 CTXN2P0C2S0 81 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 LYSMD4Q5XG99 296 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 DEFB123Q8N688 67 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 ZDHHC16Q969W1 377 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 TMEM147Q9BVK8 224 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 ATP23Q9Y6H3 246 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 SCO2A0A1W2PP80 73 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 IGLC2P0DOY2 106 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 IGLC3P0DOY3 106 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 CDKN1BP46527 198 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 FOXL1Q12952 345 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 HIST3H3Q16695 136 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 ORAOV1Q8WV07 137 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 SERTAD4Q9NUC0 356 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 SLC45A2Q9UMX9 530 aa12.31□□□□□ -0.44
SYNRG-225ENST00000619541 TNFSF11O14788 317 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 PSG4Q00888 419 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 SSPNQ14714 243 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 TMEM144Q7Z5S9 345 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 FGFRL1Q8N441 504 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 LOXL4Q96JB6 756 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 DEFB126Q9BYW3 111 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 USF3Q68DE3 2245 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 DPRXA6NFQ7 191 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 TIAF1O95411 115 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 MRPL54Q6P161 138 aaKnown RBP12.3□□□□□ -0.44
SYNRG-225ENST00000619541 SMIM15Q7Z3B0 74 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 KLHDC1Q8N7A1 406 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 TCTEX1D1Q8N7M0 179 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 SLC35D1Q9NTN3 355 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 ZG16O60844 167 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 Q56UQ5 140 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 NPCDR1Q9BY65 106 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 COX11Q9Y6N1 276 aa12.3□□□□□ -0.44
SYNRG-225ENST00000619541 DOCK7Q96N67 2140 aa12.29□□□□□ -0.44
SYNRG-225ENST00000619541 A8MXE2 369 aa12.29□□□□□ -0.44
SYNRG-225ENST00000619541 GPX1P07203 203 aa12.29□□□□□ -0.44
SYNRG-225ENST00000619541 OTX1P32242 354 aaPredicted RBP12.29□□□□□ -0.44
SYNRG-225ENST00000619541 IGFBP7Q16270 282 aa12.29□□□□□ -0.44
SYNRG-225ENST00000619541 PDE6DO43924 150 aa12.29□□□□□ -0.44
SYNRG-225ENST00000619541 QTRT1Q9BXR0 403 aaKnown RBP12.29□□□□□ -0.44
SYNRG-225ENST00000619541 A0A1W2PQM1 296 aa12.29□□□□□ -0.44
SYNRG-225ENST00000619541 SYNGR1O43759 233 aa12.29□□□□□ -0.44
SYNRG-225ENST00000619541 TRAPPC2LQ9UL33 140 aa12.29□□□□□ -0.44
SYNRG-225ENST00000619541 LY6G6EA0A0G2JKS1 128 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms