RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 SLC35E3Q7Z769 313 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 CENPVQ7Z7K6 275 aaPredicted RBP6.49□□□□□ -1.37
NEK3-209ENST00000618856 CLVS1Q8IUQ0 354 aaPredicted RBP6.49□□□□□ -1.37
NEK3-209ENST00000618856 LYSMD2Q8IV50 215 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 STPG2Q8N412 459 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 ZNF645Q8N7E2 425 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 DRAXINQ8NBI3 349 aaPredicted RBP6.49□□□□□ -1.37
NEK3-209ENST00000618856 OR5AP2Q8NGF4 316 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 GIMAP1Q8WWP7 306 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 NOL4LQ96MY1 436 aaPredicted RBP6.49□□□□□ -1.37
NEK3-209ENST00000618856 CITED2Q99967 270 aaPredicted RBP6.49□□□□□ -1.37
NEK3-209ENST00000618856 RASL11BQ9BPW5 248 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 GINS4Q9BRT9 223 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 MIXL1Q9H2W2 232 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 SCPEP1Q9HB40 452 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 CEPT1Q9Y6K0 416 aa6.49□□□□□ -1.37
NEK3-209ENST00000618856 TET2Q6N021 2002 aaPredicted RBP6.49□□□□□ -1.37
NEK3-209ENST00000618856 PSMB11A5LHX3 300 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 LINC00473A8K010 186 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 H3BMQ9 156 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 M0R1X1 148 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 SULT1C2O00338 296 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 RRHO14718 337 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 IGHG4P01861 327 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 EGR2P11161 476 aaPredicted RBP6.48□□□□□ -1.37
NEK3-209ENST00000618856 PRSS3P35030 304 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 LGALS7P47929 136 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 THBS3P49746 956 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 LUMP51884 338 aaPredicted RBP6.48□□□□□ -1.37
NEK3-209ENST00000618856 BRWD1-AS2P59051 145 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 SSBP2P81877 361 aaPredicted RBP6.48□□□□□ -1.37
NEK3-209ENST00000618856 DYRK1AQ13627 763 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 PSG5Q15238 335 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 HIST2H2BDQ6DRA6 164 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 LIN54Q6MZP7 749 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 MZT2AQ6P582 158 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 FOXRED2Q8IWF2 684 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 COMMD1Q8N668 190 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 C11orf44Q8N8P7 122 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 MINDY2Q8NBR6 621 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 WFDC9Q8NEX5 89 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 MYOZ3Q8TDC0 251 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 ADTRPQ96IZ2 230 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 SLIRPQ9GZT3 109 aaKnown RBP6.48□□□□□ -1.37
NEK3-209ENST00000618856 NXF2Q9GZY0 626 aaKnown RBP6.48□□□□□ -1.37
NEK3-209ENST00000618856 RBM38Q9H0Z9 239 aaKnown RBP6.48□□□□□ -1.37
NEK3-209ENST00000618856 NECAP2Q9NVZ3 263 aa6.48□□□□□ -1.37
NEK3-209ENST00000618856 CCDC59Q9P031 241 aaKnown RBP6.48□□□□□ -1.37
NEK3-209ENST00000618856 RBMX2Q9Y388 322 aaKnown RBP6.48□□□□□ -1.37
NEK3-209ENST00000618856 TSSC4Q9Y5U2 329 aaPredicted RBP6.48□□□□□ -1.37
NEK3-209ENST00000618856 SRRM4A7MD48 611 aaKnown RBP6.47□□□□□ -1.37
NEK3-209ENST00000618856 FCN1O00602 326 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 PEX14O75381 377 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 PPYP01298 95 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 IGLV1-40P01703 118 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 OPN1MWP04001 364 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 CSF1P09603 554 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 OPN1MW2P0DN77 364 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 OPN1MW3P0DN78 364 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 OR5H8P0DN80 308 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 RRASP10301 218 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 AADACP22760 399 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 PSMB8P28062 276 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 SLC6A1P30531 599 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 FCGR2CP31995 323 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 ARPC4P59998 168 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 RPL30P62888 115 aaKnown RBP6.47□□□□□ -1.37
NEK3-209ENST00000618856 CX3CL1P78423 397 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 NDPQ00604 133 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 KIAA0141Q14154 515 aaPredicted RBP6.47□□□□□ -1.37
NEK3-209ENST00000618856 CDK10Q15131 360 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 C9orf152Q5JTZ5 239 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 ZNF562Q6V9R5 426 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 ZBTB34Q8NCN2 500 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 OR4X2Q8NGF9 303 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 ISOC1Q96CN7 298 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 FLYWCH2Q96CP2 140 aaKnown RBP6.47□□□□□ -1.37
NEK3-209ENST00000618856 ABHD1Q96SE0 405 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 TSNAXQ99598 290 aaKnown RBP6.47□□□□□ -1.37
NEK3-209ENST00000618856 GON7Q9BXV9 100 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 OR51J1Q9H342 316 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 SLC35D1Q9NTN3 355 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 ZFP57Q9NU63 452 aa6.47□□□□□ -1.37
NEK3-209ENST00000618856 SMIM31A0A1B0GVY4 71 aa6.46□□□□□ -1.38
NEK3-209ENST00000618856 H7C2Y5 167 aa6.46□□□□□ -1.38
NEK3-209ENST00000618856 ZNF701M0R085 212 aaPredicted RBP6.46□□□□□ -1.38
NEK3-209ENST00000618856 CTDSP2O14595 271 aa6.46□□□□□ -1.38
NEK3-209ENST00000618856 BRI3O95415 125 aa6.46□□□□□ -1.38
NEK3-209ENST00000618856 APOA2P02652 100 aa6.46□□□□□ -1.38
NEK3-209ENST00000618856 ELANEP08246 267 aa6.46□□□□□ -1.38
NEK3-209ENST00000618856 SLC35B1P78383 322 aa6.46□□□□□ -1.38
NEK3-209ENST00000618856 FOXE3Q13461 319 aa6.46□□□□□ -1.38
NEK3-209ENST00000618856 ARSJQ5FYB0 599 aaPredicted RBP6.46□□□□□ -1.38
NEK3-209ENST00000618856 VAX1Q5SQQ9 334 aa6.46□□□□□ -1.38
NEK3-209ENST00000618856 TEX38Q6PEX7 206 aa6.46□□□□□ -1.38
NEK3-209ENST00000618856 ZNF66Q6ZN08 573 aa6.46□□□□□ -1.38
NEK3-209ENST00000618856 ZNF329Q86UD4 541 aa6.46□□□□□ -1.38
NEK3-209ENST00000618856 BVESQ8NE79 360 aa6.46□□□□□ -1.38
NEK3-209ENST00000618856 OSR1Q8TAX0 266 aaPredicted RBP6.46□□□□□ -1.38
NEK3-209ENST00000618856 MOB3AQ96BX8 217 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms