RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 OR5AP2Q8NGF4 316 aa9.2□□□□□ -0.94
POLR2A-209ENST00000617998 TMEM167AQ8TBQ9 72 aa9.2□□□□□ -0.94
POLR2A-209ENST00000617998 TRAV1-2A0A0B4J238 106 aa9.2□□□□□ -0.94
POLR2A-209ENST00000617998 KBTBD11-OT1A0A1B0GTJ5 212 aa9.2□□□□□ -0.94
POLR2A-209ENST00000617998 H0Y8G0 127 aa9.2□□□□□ -0.94
POLR2A-209ENST00000617998 XRCC3O43542 346 aa9.2□□□□□ -0.94
POLR2A-209ENST00000617998 RPS27AP62979 156 aaKnown RBP9.2□□□□□ -0.94
POLR2A-209ENST00000617998 C1QL2Q7Z5L3 287 aa9.2□□□□□ -0.94
POLR2A-209ENST00000617998 IL17DQ8TAD2 202 aa9.2□□□□□ -0.94
POLR2A-209ENST00000617998 TVP23CQ96ET8 276 aa9.2□□□□□ -0.94
POLR2A-209ENST00000617998 CRXO43186 299 aaPredicted RBP9.19□□□□□ -0.94
POLR2A-209ENST00000617998 GCM2O75603 506 aaPredicted RBP9.19□□□□□ -0.94
POLR2A-209ENST00000617998 ZNF415Q09FC8 603 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 LSAMPQ13449 338 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 PHC2Q8IXK0 858 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 ADAT3Q96EY9 351 aaPredicted RBP9.19□□□□□ -0.94
POLR2A-209ENST00000617998 TBL2Q9Y4P3 447 aaKnown RBP9.19□□□□□ -0.94
POLR2A-209ENST00000617998 CST4P01036 141 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 ZNF585BQ52M93 769 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 C12orf73Q69YU5 71 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 FLVCR1-AS1Q8TAF5 88 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 KCNK7Q9Y2U2 307 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 PTPN13Q12923 2485 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 IGHV1-69DA0A0B4J2H0 117 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 NPIPB6E9PJ23 425 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 IGHV1-69P01742 117 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 H3F3AP84243 136 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 FFAR4Q5NUL3 377 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 RELL2Q8NC24 303 aaPredicted RBP9.19□□□□□ -0.94
POLR2A-209ENST00000617998 PXT1Q8NFP0 134 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 S4R3C0 116 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 CFDP00746 253 aaPredicted RBP9.19□□□□□ -0.94
POLR2A-209ENST00000617998 SSX1Q16384 188 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 H3F3CQ6NXT2 135 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 PGPA6NDG6 321 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 OR2T8A6NH00 312 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 CRPP02741 224 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 SLC35E4Q6ICL7 350 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 HRH4Q9H3N8 390 aa9.19□□□□□ -0.94
POLR2A-209ENST00000617998 DOCK7Q96N67 2140 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 TMEM127O75204 238 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 SSTR5P35346 364 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 TMEM182Q6ZP80 229 aaPredicted RBP9.18□□□□□ -0.94
POLR2A-209ENST00000617998 ZNF645Q8N7E2 425 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 OR11H12B2RN74 326 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 CST7O76096 145 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 PPYP01298 95 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 MBNL2Q5VZF2 373 aaKnown RBP9.18□□□□□ -0.94
POLR2A-209ENST00000617998 OR4D11Q8NGI4 311 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 FAM210AQ96ND0 272 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 ZNF735P0CB33 412 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 GRNP28799 593 aaKnown RBP9.18□□□□□ -0.94
POLR2A-209ENST00000617998 SAA4P35542 130 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 CRYBA2P53672 197 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 APOC4P55056 127 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 SPANXN1Q5VSR9 72 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 ASCL4Q6XD76 172 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 CELF2-AS1Q8N7Q2 184 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 FAM131CQ96AQ9 280 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 TRAF4Q9BUZ4 470 aaPredicted RBP9.18□□□□□ -0.94
POLR2A-209ENST00000617998 ACACBO00763 2458 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 KIAA1671Q9BY89 1806 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 IGLV3-32A0A0A0MS00 114 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 NPIPB8E9PQR5 432 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 SOCS1O15524 211 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 CD300LDQ6UXZ3 194 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 RBPMSQ93062 196 aaKnown RBP9.18□□□□□ -0.94
POLR2A-209ENST00000617998 C21orf62Q9NYP8 219 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 RPUSD1Q9UJJ7 312 aaKnown RBP9.18□□□□□ -0.94
POLR2A-209ENST00000617998 PDCD11Q14690 1871 aaKnown RBP9.18□□□□□ -0.94
POLR2A-209ENST00000617998 TANC1Q9C0D5 1861 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 OOSP1A8MZH6 123 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 LFNGQ8NES3 379 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 FRRS1LQ9P0K9 344 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 RLFQ13129 1914 aa9.18□□□□□ -0.94
POLR2A-209ENST00000617998 ADORA2A-AS1P86434 159 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 TECRQ9NZ01 308 aaKnown RBP9.17□□□□□ -0.94
POLR2A-209ENST00000617998 CTDSP2O14595 271 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 CTAG2O75638 210 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 KCNRGQ8N5I3 272 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 C5orf17Q8NAS9 161 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 SLC24A4Q8NFF2 622 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 NAA60Q9H7X0 242 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 HIVEP2P31629 2446 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 TMEM177Q53S58 311 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 MRGPRFQ96AM1 343 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 SAMD10Q9BYL1 202 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 H2AFB1P0C5Y9 115 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 RPL7P18124 248 aaKnown RBP9.17□□□□□ -0.94
POLR2A-209ENST00000617998 S100A11P31949 105 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 GGNQ86UU5 652 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 MSRB3Q8IXL7 192 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 ZNF696Q9H7X3 374 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 FAM159AQ6UWV7 190 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 NTNG2Q96CW9 530 aa9.17□□□□□ -0.94
POLR2A-209ENST00000617998 FAM103A1Q9BTL3 118 aaKnown RBP9.17□□□□□ -0.94
POLR2A-209ENST00000617998 ARHGEF17Q96PE2 2063 aaPredicted RBP9.17□□□□□ -0.94
POLR2A-209ENST00000617998 GGCTO75223 188 aaKnown RBP9.16□□□□□ -0.94
POLR2A-209ENST00000617998 SLC6A1P30531 599 aa9.16□□□□□ -0.94
POLR2A-209ENST00000617998 RND2P52198 227 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms