RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 GAPTQ8N292 157 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 DVL3Q92997 716 aaPredicted RBP2.84□□□□□ -1.95
LPP-220ENST00000617246 TGIF2-C20orf24A0A0A6YYL0 155 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 C10orf128Q5T292 105 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 C9orf139Q6ZV77 190 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 RAB2BQ8WUD1 216 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 WSB1Q9Y6I7 421 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 ARL2-SNX15V9GYD0 113 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 CEACAM6P40199 344 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 HNRNPA0Q13151 305 aaKnown RBP2.84□□□□□ -1.95
LPP-220ENST00000617246 C5orf24Q7Z6I8 188 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 HMGN2P46Q86SG4 172 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 WDYHV1Q96HA8 205 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 SRD5A3Q9H8P0 318 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 GPR27Q9NS67 375 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 IGHV3OR15-7A0A075B7D8 119 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 LAMP1P11279 417 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 SULT1A1P50225 295 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 RAB5CP51148 216 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 GLYATL3Q5SZD4 288 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 IL17RELQ6ZVW7 336 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 Q96M85 177 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 NEU3Q9UQ49 428 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 DUXBA0A1W2PPF3 345 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 LINC01549A6NIU2 74 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 F8W735 103 aaPredicted RBP2.84□□□□□ -1.95
LPP-220ENST00000617246 RPS20P60866 119 aaKnown RBP2.84□□□□□ -1.95
LPP-220ENST00000617246 ZNF181Q2M3W8 571 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 ZNF2Q9BSG1 426 aaPredicted RBP2.84□□□□□ -1.95
LPP-220ENST00000617246 FGFBP2Q9BYJ0 223 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 LIPT2A6NK58 231 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 MPTX1A8MV57 137 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 FGF9P31371 208 aaPredicted RBP2.84□□□□□ -1.96
LPP-220ENST00000617246 PMELP40967 661 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 SIGLEC15Q6ZMC9 328 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 C9orf106Q8NAJ2 232 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 MRPL30Q8TCC3 161 aaKnown RBP2.84□□□□□ -1.96
LPP-220ENST00000617246 SIGLEC11Q96RL6 698 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 TMEM14BQ9NUH8 114 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 BTF3P20290 206 aaKnown RBP2.84□□□□□ -1.96
LPP-220ENST00000617246 HNRNPFP52597 415 aaKnown RBP2.84□□□□□ -1.96
LPP-220ENST00000617246 HSPB11Q9Y547 144 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 RAB6AP20340 208 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 CRYBB2P43320 205 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 RNF144BQ7Z419 303 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 BATF2Q8N1L9 274 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 RNF152Q8N8N0 203 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 ARHGDIGQ99819 225 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 OR2H1Q9GZK4 316 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 UBE2L3P68036 154 aaKnown RBP2.84□□□□□ -1.96
LPP-220ENST00000617246 LOXL1Q08397 574 aaPredicted RBP2.84□□□□□ -1.96
LPP-220ENST00000617246 ZNF154Q13106 437 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 ATP6V1FQ16864 119 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 TMEM183BQ1AE95 376 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 RTN4IP1Q8WWV3 396 aaPredicted RBP2.84□□□□□ -1.96
LPP-220ENST00000617246 CFHR4Q92496 578 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 MRPL16Q9NX20 251 aaKnown RBP2.84□□□□□ -1.96
LPP-220ENST00000617246 H3BRM9 83 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 TCTAP57738 103 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 TBC1D26Q86UD7 250 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 PFN4Q8NHR9 129 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 NIPSNAP1Q9BPW8 284 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 MEGF9Q9H1U4 602 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 PGPEP1Q9NXJ5 209 aa2.84□□□□□ -1.96
LPP-220ENST00000617246 ZNF256Q9Y2P7 627 aaPredicted RBP2.84□□□□□ -1.96
LPP-220ENST00000617246 MFNGO00587 321 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 CIARTQ8N365 385 aaPredicted RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 LFNGQ8NES3 379 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 CLDND2Q8NHS1 167 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 C7orf34Q96L11 122 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 MRPL18Q9H0U6 180 aaKnown RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 GYPBP06028 91 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 SPCS3P61009 180 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 RPL32P62910 135 aaKnown RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 LRRC28Q86X40 367 aaPredicted RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 KLF14Q8TD94 323 aaPredicted RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 ZDHHC18Q9NUE0 388 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 ZNF257Q9Y2Q1 563 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 KBTBD11O94819 623 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 ALPLP05186 524 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 MESP2Q0VG99 397 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 ATP6V0E2Q8NHE4 81 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 CDCA4Q9BXL8 241 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 DOCK11Q5JSL3 2073 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 ATRXP46100 2492 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 TSPAN13O95857 204 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 TCEAL1Q15170 157 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 SPSB3Q6PJ21 355 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 OR10R2Q8NGX6 335 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 TAF15Q92804 592 aaKnown RBP eCLIP2.83□□□□□ -1.96
LPP-220ENST00000617246 PEF1Q9UBV8 284 aaKnown RBP2.83□□□□□ -1.96
LPP-220ENST00000617246 LIMS3P0CW19 117 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 LIMS4P0CW20 117 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 GP9P14770 177 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 FAM3AP98173 230 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 TDRG1Q3Y452 100 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 RFPL4BQ6ZWI9 263 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 OR11H1Q8NG94 326 aa2.83□□□□□ -1.96
LPP-220ENST00000617246 OR1N2Q8NGR9 330 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms