RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 KITLGP21583 273 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 CEACAM6P40199 344 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 TCL1AP56279 114 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 ACTL10Q5JWF8 245 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 C10orf128Q5T292 105 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 C1orf194Q5T5A4 169 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 RHBDD2Q6NTF9 364 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 MBD3L1Q8WWY6 194 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 TMEM54Q969K7 222 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 NUDT11Q96G61 164 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 P2RX4Q99571 388 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 TP73-AS1Q9UF72 201 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 MDFIC2A0A1B0GVS7 189 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 A0A1W2PPV4 95 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 DEFB108AA8MXU0 73 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 SLC25A6P12236 298 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 NTF3P20783 257 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 NPPCP23582 126 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 CD27P26842 260 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 CCKARP32238 428 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 DAZAP2Q15038 168 aaPredicted RBP11.15□□□□□ -0.62
MSH6-214ENST00000616033 SAXO1Q8IYX7 474 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 FGFRL1Q8N441 504 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 SLC35E1Q96K37 410 aa11.15□□□□□ -0.62
MSH6-214ENST00000616033 PHF7Q9BWX1 381 aaPredicted RBP11.15□□□□□ -0.62
MSH6-214ENST00000616033 IGHV3-43A0A0B4J1X8 118 aa11.15□□□□□ -0.63
MSH6-214ENST00000616033 DUXBA0A1W2PPF3 345 aa11.15□□□□□ -0.63
MSH6-214ENST00000616033 SERF1AO75920 110 aa11.15□□□□□ -0.63
MSH6-214ENST00000616033 IGHV3-43DP0DP04 118 aa11.15□□□□□ -0.63
MSH6-214ENST00000616033 OTX2P32243 289 aa11.15□□□□□ -0.63
MSH6-214ENST00000616033 IER3P46695 156 aa11.15□□□□□ -0.63
MSH6-214ENST00000616033 ATP6V1FQ16864 119 aa11.15□□□□□ -0.63
MSH6-214ENST00000616033 FBXW9Q5XUX1 488 aa11.15□□□□□ -0.63
MSH6-214ENST00000616033 CXorf67Q86X51 503 aaPredicted RBP11.15□□□□□ -0.63
MSH6-214ENST00000616033 TRAV1-1A0A0B4J248 108 aa11.14□□□□□ -0.63
MSH6-214ENST00000616033 ZIC3O60481 467 aa11.14□□□□□ -0.63
MSH6-214ENST00000616033 GUSBP11Q6P575 273 aa11.14□□□□□ -0.63
MSH6-214ENST00000616033 SMIM15Q7Z3B0 74 aa11.14□□□□□ -0.63
MSH6-214ENST00000616033 TPRX1Q8N7U7 411 aa11.14□□□□□ -0.63
MSH6-214ENST00000616033 OR1L1Q8NH94 360 aa11.14□□□□□ -0.63
MSH6-214ENST00000616033 RFESDQ8TAC1 157 aa11.14□□□□□ -0.63
MSH6-214ENST00000616033 ST6GALNAC6Q969X2 333 aa11.14□□□□□ -0.63
MSH6-214ENST00000616033 TECTBQ96PL2 329 aa11.14□□□□□ -0.63
MSH6-214ENST00000616033 DEGS1O15121 323 aa11.14□□□□□ -0.63
MSH6-214ENST00000616033 SERF2P84101 59 aa11.14□□□□□ -0.63
MSH6-214ENST00000616033 ABLIM2Q6H8Q1 611 aa11.14□□□□□ -0.63
MSH6-214ENST00000616033 ZCCHC14Q8WYQ9 949 aaKnown RBP11.14□□□□□ -0.63
MSH6-214ENST00000616033 PINX1Q96BK5 328 aaKnown RBP11.14□□□□□ -0.63
MSH6-214ENST00000616033 FGF23Q9GZV9 251 aaPredicted RBP11.14□□□□□ -0.63
MSH6-214ENST00000616033 ZFP30Q9Y2G7 519 aa11.14□□□□□ -0.63
MSH6-214ENST00000616033 TIMM8BQ9Y5J9 83 aaPredicted RBP11.14□□□□□ -0.63
MSH6-214ENST00000616033 HNRNPA3P51991 378 aaKnown RBP11.13□□□□□ -0.63
MSH6-214ENST00000616033 PCSK4Q6UW60 755 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 Q6ZWC4 215 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 NUDT10Q8NFP7 164 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 OR10P1Q8NGE3 313 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 C10orf35Q96D05 121 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 TMEM9BQ9NQ34 198 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 DCHS1Q96JQ0 3298 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 F6UZH7 168 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 VAMP5O95183 116 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 RFPL3SP0C7P2 107 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 CRISP2P16562 243 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 CISD2Q8N5K1 135 aaKnown RBP11.13□□□□□ -0.63
MSH6-214ENST00000616033 GAL3ST2Q9H3Q3 398 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 PLSCR2Q9NRY7 297 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 OCIAD1Q9NX40 245 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 CTXND1A0A1B0GTU2 59 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 M0QZK8 103 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 FCN1O00602 326 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 RBFOX2O43251 390 aaKnown RBP eCLIP11.13□□□□□ -0.631e-6■□□□□ 8.9
MSH6-214ENST00000616033 GGCTO75223 188 aaKnown RBP11.13□□□□□ -0.63
MSH6-214ENST00000616033 SRFP11831 508 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 GLB1P16278 677 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 COX5AP20674 150 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 OR8B8Q15620 311 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 DEPPQ9NTK1 212 aa11.13□□□□□ -0.63
MSH6-214ENST00000616033 OR6C6A6NF89 314 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 A8MXE2 369 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 IL6RP08887 468 aaPredicted RBP11.12□□□□□ -0.63
MSH6-214ENST00000616033 SSMEM1Q8WWF3 244 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 TCFL5Q9UL49 500 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 CADP27708 2225 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 TMEM210A6NLX4 147 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 TMEM238C9JI98 176 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 ETV2O00321 342 aaPredicted RBP11.12□□□□□ -0.63
MSH6-214ENST00000616033 GNB1P62873 340 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 SLC25A53Q5H9E4 307 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 OR10D3Q8NH80 312 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 A0A1W2PR77 199 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 ZNF891A8MT65 544 aaPredicted RBP11.12□□□□□ -0.63
MSH6-214ENST00000616033 SH2D1BO14796 132 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 FGF12P61328 243 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 WDR74Q6RFH5 385 aaPredicted RBP11.12□□□□□ -0.63
MSH6-214ENST00000616033 TGIF2LYQ8IUE0 185 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 ANAPC16Q96DE5 110 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 PRRG4Q9BZD6 226 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 TMEM106BQ9NUM4 274 aa11.12□□□□□ -0.63
MSH6-214ENST00000616033 KIAA1549Q9HCM3 1950 aa11.11□□□□□ -0.63
MSH6-214ENST00000616033 ODAMA1E959 279 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms