RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 LOXL3P58215 753 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 DSCR9P59020 149 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 GUK1Q16774 197 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 CLEC12BQ2HXU8 276 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 FAM201AQ5SY85 155 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 UQCC3Q6UW78 93 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 C20orf204Q6ZNR8 217 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 CLRN3Q8NCR9 226 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 OR2A7Q96R45 310 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 KIAA1671Q9BY89 1806 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 C10orf113Q5VZT2 155 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 C1QL2Q7Z5L3 287 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 LEAP2Q969E1 77 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 IL22RA2Q969J5 263 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 WFIKKN1Q96NZ8 548 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 DBX1A6NMT0 343 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 G3V3Q6 166 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 TDGF1P13385 188 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 NTF3P20783 257 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 CRYGSP22914 178 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 B2MP61769 119 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 OVCH2Q7RTZ1 564 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 SSMEM1Q8WWF3 244 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 TMEM140Q9NV12 185 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 LINC00312Q9Y6C7 94 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 CACNA1BQ00975 2339 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 LTBP2Q14767 1821 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 SFTA3P0C7M3 94 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 ZP3P21754 424 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 LY6EQ16553 131 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 FAM78BQ5VT40 261 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 RSRP1Q9BUV0 290 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 TLNRD1Q9H1K6 362 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 MMP26Q9NRE1 261 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 SLC25A15Q9Y619 301 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 SERTM2A0A1B0GWG4 89 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 C7orf66A4D0T2 115 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 C12orf77C9JDV5 145 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 FAM90A26D6RGX4 464 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 ZNF737O75373 536 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 TGFAP01135 160 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 IGFBP3P17936 291 aaPredicted RBP7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 UNC119Q13432 240 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 PLAC9Q5JTB6 97 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 FGFRL1Q8N441 504 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 CTDSP1Q9GZU7 261 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 KBTBD11-OT1A0A1B0GTJ5 212 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 C1QTNF9BB2RNN3 333 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 C1QTNF9P0C862 333 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 FABP9Q0Z7S8 132 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 NABP1Q96AH0 204 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 C7orf69Q9H7B7 122 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 NPVFQ9HCQ7 196 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 CLDN16Q9Y5I7 305 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 GBF1Q92538 1859 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 CD74P04233 296 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 PAX6P26367 422 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 PPOXP50336 477 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 FOXG1P55316 489 aaPredicted RBP7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 ERVFC1-1P60608 527 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 HSPE1P61604 102 aaKnown RBP7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 CD300CQ08708 224 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 MBNL2Q5VZF2 373 aaKnown RBP7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 HSD17B13Q7Z5P4 300 aaPredicted RBP7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 FGFBP3Q8TAT2 258 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 MANBALQ9NQG1 85 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 WSB1Q9Y6I7 421 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 IGHV3OR16-10A0A075B7F0 116 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 CXCL3P19876 107 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 ID1P41134 155 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 NPDC1Q9NQX5 325 aaPredicted RBP7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 AUP1Q9Y679 476 aa7.99□□□□□ -1.13
CLTCL1-208ENST00000615606 VSIG10L2P0DP72 767 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 GALR1P47211 349 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 SELENOTP62341 195 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 PAX5Q02548 391 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 MYPOPQ86VE0 399 aaPredicted RBP7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 DRAM1Q8N682 238 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 WDR31Q8NA23 367 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 TTC28Q96AY4 2481 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 MARCH11A6NNE9 402 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 CEACAM18A8MTB9 384 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 GNG4P50150 75 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 RPS11P62280 158 aaKnown RBP eCLIP7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 OR4A5Q8NH83 315 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 LSM10Q969L4 123 aaKnown RBP7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 QTRT1Q9BXR0 403 aaKnown RBP7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 IFT22Q9H7X7 185 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 ZNF586Q9NXT0 402 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 RABAC1Q9UI14 185 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 KBTBD11O94819 623 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 CD1BP29016 333 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 WNT5AP41221 380 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 WDR82Q6UXN9 313 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 C16orf82Q7Z2V1 217 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 SIGLECL1Q8N7X8 197 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 OR4P4Q8NGL7 312 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 OR10S1Q8NGN2 331 aa7.98□□□□□ -1.13
CLTCL1-208ENST00000615606 TMEM18Q96B42 140 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms