RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 TRAV3A0A0B4J244 114 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 METTL21EPA6NDL7 271 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 GNG2P59768 71 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 KRTAP10-11P60412 298 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 ASPHD1Q5U4P2 390 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 SSX9Q7RTT3 188 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 THNSL2Q86YJ6 484 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 C8orf31Q8N9H6 132 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 BEST4Q8NFU0 473 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 RANBP3Q9H6Z4 567 aaPredicted RBP4.45□□□□□ -1.7
CPNE3-208ENST00000614678 ANXA10Q9UJ72 324 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 M0QYG6 137 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 GABARAPO95166 117 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 CA2P00918 260 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 GSTP1P09211 210 aaKnown RBP4.45□□□□□ -1.7
CPNE3-208ENST00000614678 PI3P19957 117 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 FCGR2CP31995 323 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 SOX6P35712 828 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 TALDO1P37837 337 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 PSMD7P51665 324 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 CFHR3Q02985 330 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 PSG5Q15238 335 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 C5orf64Q2M2E5 130 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 OR4A4PQ8NGN8 299 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 SECTM1Q8WVN6 248 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 RAX2Q96IS3 184 aa4.45□□□□□ -1.7
CPNE3-208ENST00000614678 METTL1Q9UBP6 276 aaKnown RBP4.45□□□□□ -1.7
CPNE3-208ENST00000614678 RBM7Q9Y580 266 aaKnown RBP4.45□□□□□ -1.7
CPNE3-208ENST00000614678 A0A1B0GUS0 222 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 NBR2O15453 112 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 CRYZL1O95825 349 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 EDN2P20800 178 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 PPIFP30405 207 aaKnown RBP4.44□□□□□ -1.7
CPNE3-208ENST00000614678 DUTP33316 252 aaKnown RBP4.44□□□□□ -1.7
CPNE3-208ENST00000614678 IZUMO4Q1ZYL8 232 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 ZNF818PQ6ZRF7 136 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 ANKRD13BQ86YJ7 626 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 KLHL30-AS1Q8NEE0 82 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 OR5T1Q8NG75 326 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 GRPEL2Q8TAA5 225 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 DDB2Q92466 427 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 RASL11BQ9BPW5 248 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 RAB18Q9NP72 206 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 TRBV12-3P01733 135 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 ZNF182P17025 639 aaPredicted RBP4.44□□□□□ -1.7
CPNE3-208ENST00000614678 RAB25P57735 213 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 RPS16P62249 146 aaKnown RBP4.44□□□□□ -1.7
CPNE3-208ENST00000614678 MRPS15P82914 257 aaKnown RBP4.44□□□□□ -1.7
CPNE3-208ENST00000614678 STEAP3Q658P3 488 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 LIN54Q6MZP7 749 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 LIAT1Q6ZQX7 453 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 PTX4Q96A99 478 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 A0A1W2PN81 502 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 DPPA5A6NC42 116 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 OOSP1A8MZH6 123 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 M0QZ24 198 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 RRHO14718 337 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 FCGR3BO75015 233 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 CHRNA7P36544 502 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 EIF4EBP1Q13541 118 aaPredicted RBP4.44□□□□□ -1.7
CPNE3-208ENST00000614678 TMEM69Q5SWH9 247 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 LIN7CQ9NUP9 197 aaKnown RBP4.44□□□□□ -1.7
CPNE3-208ENST00000614678 PIPOXQ9P0Z9 390 aa4.44□□□□□ -1.7
CPNE3-208ENST00000614678 HMX3A6NHT5 357 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 H3BMQ9 156 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 SULT1C2O00338 296 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 XRCC3O43542 346 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 NDUFA3O95167 84 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 HRH1P35367 487 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 LUMP51884 338 aaPredicted RBP4.43□□□□□ -1.7
CPNE3-208ENST00000614678 ZNF660Q6AZW8 331 aaPredicted RBP4.43□□□□□ -1.7
CPNE3-208ENST00000614678 TRAT1Q6PIZ9 186 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 MRPL41Q8IXM3 137 aaKnown RBP4.43□□□□□ -1.7
CPNE3-208ENST00000614678 OR51H1Q8NH63 302 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 DCUN1D5Q9BTE7 237 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 MMP27Q9H306 513 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 SLC35D1Q9NTN3 355 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 KMT2CQ8NEZ4 4911 aaKnown RBP4.43□□□□□ -1.7
CPNE3-208ENST00000614678 DBX1A6NMT0 343 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 FGF16O43320 207 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 OR5H8P0DN80 308 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 DGCR2P98153 550 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 PLGLAQ15195 96 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 C2orf68Q2NKX9 166 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 UBE2NLQ5JXB2 153 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 C11orf87Q6NUJ2 197 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 MOB1BQ7L9L4 216 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 HOGA1Q86XE5 327 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 ABHD5Q8WTS1 349 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 MRGPRFQ96AM1 343 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.43□□□□□ -1.7
CPNE3-208ENST00000614678 ZNF221Q9UK13 617 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 TMA7Q9Y2S6 64 aaKnown RBP4.43□□□□□ -1.7
CPNE3-208ENST00000614678 NSG2Q9Y328 171 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 OR2W1Q9Y3N9 320 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 STAB2Q8WWQ8 2551 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 hCG_2014768A0A024R1R8 64 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 REG1AP05451 166 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 IL3RAP26951 378 aa4.43□□□□□ -1.7
CPNE3-208ENST00000614678 PSMB8P28062 276 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms