RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 MPV17P39210 176 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 GPM6AP51674 278 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 MTCP1P56278 107 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 ADIRFQ15847 76 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 FAM90A2PQ658T7 463 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 PCSK4Q6UW60 755 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 CMTM1Q8IZ96 169 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 FBXL14Q8N1E6 418 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 MOB1AQ9H8S9 216 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 CHD6Q8TD26 2715 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 USP9XQ93008 2570 aaPredicted RBP8.41□□□□□ -1.06
GGA3-221ENST00000614198 IGKV1-12A0A0C4DH73 117 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 IGKV1D-12P01611 117 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 TFF1P04155 84 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 CEACAM8P31997 349 aaPredicted RBP8.41□□□□□ -1.06
GGA3-221ENST00000614198 NPBWR2P48146 333 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 EWSR1Q01844 656 aaKnown RBP eCLIP8.41□□□□□ -1.06
GGA3-221ENST00000614198 PMS2P11Q13670 270 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 MSMPQ1L6U9 139 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 TGIF2LYQ8IUE0 185 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 VPS25Q9BRG1 176 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 DNAJC4Q9NNZ3 241 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 FKBP11Q9NYL4 201 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 LAMP3Q9UQV4 416 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 UBE2J1Q9Y385 318 aaPredicted RBP8.41□□□□□ -1.06
GGA3-221ENST00000614198 TRGV8A0A0C4DH27 118 aa8.4□□□□□ -1.06
GGA3-221ENST00000614198 LOC102723971A0A1B0GUV8 181 aa8.4□□□□□ -1.06
GGA3-221ENST00000614198 IFNL4K9M1U5 179 aa8.4□□□□□ -1.06
GGA3-221ENST00000614198 HBE1P02100 147 aa8.4□□□□□ -1.06
GGA3-221ENST00000614198 CA6P23280 308 aa8.4□□□□□ -1.06
GGA3-221ENST00000614198 DUSP1P28562 367 aa8.4□□□□□ -1.06
GGA3-221ENST00000614198 GNRHRP30968 328 aa8.4□□□□□ -1.06
GGA3-221ENST00000614198 BRS3P32247 399 aa8.4□□□□□ -1.06
GGA3-221ENST00000614198 FABP6P51161 128 aa8.4□□□□□ -1.06
GGA3-221ENST00000614198 HERV-K104P61576 105 aa8.4□□□□□ -1.06
GGA3-221ENST00000614198 TLE4Q04727 773 aa8.4□□□□□ -1.06
GGA3-221ENST00000614198 P2RY6Q15077 328 aa8.4□□□□□ -1.06
GGA3-221ENST00000614198 SDF2L1Q9HCN8 221 aa8.4□□□□□ -1.06
GGA3-221ENST00000614198 PPIAL4AQ9Y536 164 aa8.4□□□□□ -1.06
GGA3-221ENST00000614198 ZNF462Q96JM2 2506 aa8.4□□□□□ -1.06
GGA3-221ENST00000614198 IGKV1D-8A0A087WSZ0 117 aa8.4□□□□□ -1.07
GGA3-221ENST00000614198 NRASP01111 189 aa8.4□□□□□ -1.07
GGA3-221ENST00000614198 CECR9P0C854 216 aa8.4□□□□□ -1.07
GGA3-221ENST00000614198 IRF2P14316 349 aa8.4□□□□□ -1.07
GGA3-221ENST00000614198 FGF8P55075 233 aaPredicted RBP8.4□□□□□ -1.07
GGA3-221ENST00000614198 RBX1P62877 108 aa8.4□□□□□ -1.07
GGA3-221ENST00000614198 PLP2Q04941 152 aa8.4□□□□□ -1.07
GGA3-221ENST00000614198 MPV17LQ2QL34 196 aa8.4□□□□□ -1.07
GGA3-221ENST00000614198 PLCXD3Q63HM9 321 aa8.4□□□□□ -1.07
GGA3-221ENST00000614198 COLCA1Q6ZS62 124 aa8.4□□□□□ -1.07
GGA3-221ENST00000614198 LGI3Q8N145 548 aa8.4□□□□□ -1.07
GGA3-221ENST00000614198 BOD1Q96IK1 185 aa8.4□□□□□ -1.07
GGA3-221ENST00000614198 GPHA2Q96T91 129 aa8.4□□□□□ -1.07
GGA3-221ENST00000614198 DECR2Q9NUI1 292 aa8.4□□□□□ -1.07
GGA3-221ENST00000614198 PFN1P07737 140 aaKnown RBP8.39□□□□□ -1.07
GGA3-221ENST00000614198 ELLP55199 621 aaPredicted RBP8.39□□□□□ -1.07
GGA3-221ENST00000614198 UCP3P55916 312 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 PIGYQ3MUY2 71 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 ZNF66Q6ZN08 573 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 C11orf42Q8N5U0 333 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 OR5C1Q8NGR4 320 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 OR11L1Q8NGX0 322 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 TMEM170AQ8WVE7 144 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 CEBPZOSA8MTT3 80 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 PRRG2O14669 202 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 ITGB1BP1O14713 200 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 PITX3O75364 302 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 OR10J1P30954 320 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 TMEM187Q14656 261 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 SSX7Q7RTT5 188 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 LRTM2Q8N967 370 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 SSC4DQ8WTU2 575 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 FAM122AQ96E09 287 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 REPIN1Q9BWE0 567 aaKnown RBP8.39□□□□□ -1.07
GGA3-221ENST00000614198 GAL3ST2Q9H3Q3 398 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 KIAA2026Q5HYC2 2103 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 ANKHD1Q8IWZ3 2542 aaKnown RBP8.39□□□□□ -1.07
GGA3-221ENST00000614198 TRAV1-1A0A0B4J248 108 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 IGHV1-18A0A0C4DH31 117 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 A0A1W2PPQ1 181 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 ZNF732B4DXR9 585 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 M0R1B8 84 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 HSPB6O14558 160 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 HPRT1P00492 218 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 IL6RP08887 468 aaPredicted RBP8.39□□□□□ -1.07
GGA3-221ENST00000614198 ARR3P36575 388 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 SPRNQ5BIV9 151 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 DPPA3Q6W0C5 159 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 BHLHA15Q7RTS1 189 aaPredicted RBP8.39□□□□□ -1.07
GGA3-221ENST00000614198 MRPL21Q7Z2W9 205 aaKnown RBP8.39□□□□□ -1.07
GGA3-221ENST00000614198 SLC25A40Q8TBP6 338 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 MSL2Q9HCI7 577 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 NAGKQ9UJ70 344 aa8.39□□□□□ -1.07
GGA3-221ENST00000614198 SMPD2O60906 423 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 COX5AP20674 150 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 PRDX4Q13162 271 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 KRTCAP3Q53RY4 240 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 ZNF695Q8IW36 515 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 FAM89BQ8N5H3 189 aa8.38□□□□□ -1.07
GGA3-221ENST00000614198 OR2C3Q8N628 320 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms