RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ESDP10768 282 aa18.55■□□□□ 0.56
POLR2J3-220ENST00000613744 FUT6P51993 359 aa18.55■□□□□ 0.56
POLR2J3-220ENST00000613744 FAM180AQ6UWF9 173 aa18.55■□□□□ 0.56
POLR2J3-220ENST00000613744 TMEM144Q7Z5S9 345 aa18.55■□□□□ 0.56
POLR2J3-220ENST00000613744 NABP1Q96AH0 204 aa18.55■□□□□ 0.56
POLR2J3-220ENST00000613744 DIRC2Q96SL1 478 aa18.55■□□□□ 0.56
POLR2J3-220ENST00000613744 DNAJC13O75165 2243 aa18.55■□□□□ 0.56
POLR2J3-220ENST00000613744 SVILO95425 2214 aa18.55■□□□□ 0.56
POLR2J3-220ENST00000613744 SLC22A20A6NK97 555 aa18.54■□□□□ 0.56
POLR2J3-220ENST00000613744 FBXW9Q5XUX1 488 aa18.54■□□□□ 0.56
POLR2J3-220ENST00000613744 LSM10Q969L4 123 aaKnown RBP18.54■□□□□ 0.56
POLR2J3-220ENST00000613744 SNRNP40Q96DI7 357 aaKnown RBP18.54■□□□□ 0.56
POLR2J3-220ENST00000613744 TNFSF11O14788 317 aa18.54■□□□□ 0.56
POLR2J3-220ENST00000613744 IL3RAP26951 378 aa18.54■□□□□ 0.56
POLR2J3-220ENST00000613744 TPPP2P59282 170 aa18.54■□□□□ 0.56
POLR2J3-220ENST00000613744 GPR146Q96CH1 333 aa18.54■□□□□ 0.56
POLR2J3-220ENST00000613744 KALRNO60229 2985 aa18.54■□□□□ 0.56
POLR2J3-220ENST00000613744 TRGV5A0A0B4J1U4 118 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 CTXND1A0A1B0GTU2 59 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 GFRA1P56159 465 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 PPP1CBP62140 327 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 RAC1P63000 192 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 FOXL1Q12952 345 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 SNAI3Q3KNW1 292 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 DMRTA1Q5VZB9 504 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 BRICD5Q6PL45 260 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 NUFIP2Q7Z417 695 aaKnown RBP18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 SPTA1P02549 2419 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 KIR2DS1A0A191URI9 304 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 LRP5LA4QPB2 252 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 SYNGR2O43760 224 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 LILRA1O75019 489 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 KIR2DS4P43632 304 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 CLDN17P56750 224 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 SRYQ05066 204 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 KIR2DS1Q14954 304 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 C3AR1Q16581 482 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 SAPCD1Q5SSQ6 148 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 Q8NFD4 153 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 CMTM2Q8TAZ6 248 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 NEK7Q8TDX7 302 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 CHODLQ9H9P2 273 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 PSENENQ9NZ42 101 aa18.53■□□□□ 0.56
POLR2J3-220ENST00000613744 IGSF10Q6WRI0 2623 aa18.52■□□□□ 0.56
POLR2J3-220ENST00000613744 ZNF814B7Z6K7 855 aa18.52■□□□□ 0.56
POLR2J3-220ENST00000613744 MLNRO43193 412 aa18.52■□□□□ 0.56
POLR2J3-220ENST00000613744 PGLYRP1O75594 196 aaPredicted RBP18.52■□□□□ 0.56
POLR2J3-220ENST00000613744 NRASP01111 189 aa18.52■□□□□ 0.56
POLR2J3-220ENST00000613744 CRYGSP22914 178 aa18.52■□□□□ 0.56
POLR2J3-220ENST00000613744 F2RP25116 425 aa18.52■□□□□ 0.56
POLR2J3-220ENST00000613744 COTL1Q14019 142 aa18.52■□□□□ 0.56
POLR2J3-220ENST00000613744 TAF15Q92804 592 aaKnown RBP eCLIP18.52■□□□□ 0.56
POLR2J3-220ENST00000613744 NEIL1Q96FI4 390 aaPredicted RBP18.52■□□□□ 0.56
POLR2J3-220ENST00000613744 MSL2Q9HCI7 577 aa18.52■□□□□ 0.56
POLR2J3-220ENST00000613744 AURKAIP1Q9NWT8 199 aaPredicted RBP18.52■□□□□ 0.56
POLR2J3-220ENST00000613744 PLEK2Q9NYT0 353 aa18.52■□□□□ 0.56
POLR2J3-220ENST00000613744 SPRR3Q9UBC9 169 aa18.52■□□□□ 0.56
POLR2J3-220ENST00000613744 SHANK1Q9Y566 2161 aa18.51■□□□□ 0.55
POLR2J3-220ENST00000613744 A0A0J9YW62 118 aa18.51■□□□□ 0.55
POLR2J3-220ENST00000613744 OR6C6A6NF89 314 aa18.51■□□□□ 0.55
POLR2J3-220ENST00000613744 SELENOTP62341 195 aa18.51■□□□□ 0.55
POLR2J3-220ENST00000613744 TPTE2P1Q5T6R2 138 aa18.51■□□□□ 0.55
POLR2J3-220ENST00000613744 H3BP45 60 aa18.51■□□□□ 0.55
POLR2J3-220ENST00000613744 CLDN15P56746 228 aa18.51■□□□□ 0.55
POLR2J3-220ENST00000613744 YPEL3P61236 119 aaPredicted RBP18.51■□□□□ 0.55
POLR2J3-220ENST00000613744 TOMM20LQ6UXN7 152 aa18.51■□□□□ 0.55
POLR2J3-220ENST00000613744 SDSLQ96GA7 329 aa18.51■□□□□ 0.55
POLR2J3-220ENST00000613744 OR51B6Q9H340 312 aa18.51■□□□□ 0.55
POLR2J3-220ENST00000613744 IGHV3-15A0A0B4J1V0 119 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 GJE1A6NN92 205 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 SIAH2O43255 324 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 NXPH3O95157 252 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 NAPSAO96009 420 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 TMEM256Q8N2U0 113 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 RPP25LQ8N5L8 163 aaKnown RBP18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 GAL3ST2Q9H3Q3 398 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 CCL28Q9NRJ3 127 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 TMPRSS2O15393 492 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 DHHO43323 396 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 ARL16Q0P5N6 197 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 OR5I1Q13606 314 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 GGNQ86UU5 652 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 HAPLN4Q86UW8 402 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 OR4F5Q8NH21 305 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 OR4F4Q96R69 305 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 VAMP8Q9BV40 100 aa18.5■□□□□ 0.55
POLR2J3-220ENST00000613744 NCOA6Q14686 2063 aaPredicted RBP18.49■□□□□ 0.55
POLR2J3-220ENST00000613744 IGKV1D-13A0A0B4J2D9 117 aa18.49■□□□□ 0.55
POLR2J3-220ENST00000613744 NPIPA2E9PIF3 369 aa18.49■□□□□ 0.55
POLR2J3-220ENST00000613744 NPIPA3F8WFD2 350 aa18.49■□□□□ 0.55
POLR2J3-220ENST00000613744 IGKV1-13P0DP09 117 aa18.49■□□□□ 0.55
POLR2J3-220ENST00000613744 SELEP16581 610 aa18.49■□□□□ 0.55
POLR2J3-220ENST00000613744 BBC3Q96PG8 261 aaPredicted RBP18.49■□□□□ 0.55
POLR2J3-220ENST00000613744 A0A0G2JRQ6 117 aa18.48■□□□□ 0.55
POLR2J3-220ENST00000613744 A0A0U1RQK1 487 aa18.48■□□□□ 0.55
POLR2J3-220ENST00000613744 ZNF320A2RRD8 509 aa18.48■□□□□ 0.55
POLR2J3-220ENST00000613744 SLC33A1O00400 549 aaPredicted RBP18.48■□□□□ 0.55
POLR2J3-220ENST00000613744 ITGB1BP1O14713 200 aa18.48■□□□□ 0.55
POLR2J3-220ENST00000613744 IGHG3P01860 377 aa18.48■□□□□ 0.55
POLR2J3-220ENST00000613744 SERPINE2P07093 398 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms