RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 CMYA5Q8N3K9 4069 aa10.52□□□□□ -0.73
SENP3-209ENST00000610454 TRIM64CA6NLI5 447 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 J3QRK9 145 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 WIPF1O43516 503 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 PROP1O75360 226 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 SLC22A5O76082 557 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 DUS4LO95620 317 aaKnown RBP10.51□□□□□ -0.73
SENP3-209ENST00000610454 RPLP1P05386 114 aaKnown RBP10.51□□□□□ -0.73
SENP3-209ENST00000610454 NFYAP23511 347 aaPredicted RBP10.51□□□□□ -0.73
SENP3-209ENST00000610454 CBX5P45973 191 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 TMEM267Q0VDI3 215 aaPredicted RBP10.51□□□□□ -0.73
SENP3-209ENST00000610454 ECSCRQ19T08 205 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 PDLIM3Q53GG5 364 aaPredicted RBP10.51□□□□□ -0.73
SENP3-209ENST00000610454 OXLD1Q5BKU9 147 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 TMEM69Q5SWH9 247 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 SAMD5Q5TGI4 173 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 ZNF660Q6AZW8 331 aaPredicted RBP10.51□□□□□ -0.73
SENP3-209ENST00000610454 SAMD12Q8N8I0 201 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 BEST4Q8NFU0 473 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 RCC1LQ96I51 464 aaKnown RBP10.51□□□□□ -0.73
SENP3-209ENST00000610454 HARBI1Q96MB7 349 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 CLCC1Q96S66 551 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 AUNIPQ9H7T9 357 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 IFT46Q9NQC8 304 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 OR2W1Q9Y3N9 320 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 A3GALT2U3KPV4 340 aa10.51□□□□□ -0.73
SENP3-209ENST00000610454 G3V318 75 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 SHOXO15266 292 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 SLC25A17O43808 307 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 SSX5O60225 188 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 CD40LGP29965 261 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 MYCNOSP40205 109 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 LGALS7P47929 136 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 RAB25P57735 213 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 LINC00205P59089 165 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 VBP1P61758 197 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 CX3CL1P78423 397 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 CFHR3Q02985 330 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 PSG5Q15238 335 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 BEAN1Q3B7T3 259 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 LCNL1Q6ZST4 164 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 ZNF645Q8N7E2 425 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 TCTEX1D1Q8N7M0 179 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 OR13F1Q8NGS4 319 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 SLC25A46Q96AG3 418 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 KCTD12Q96CX2 325 aaKnown RBP10.5□□□□□ -0.73
SENP3-209ENST00000610454 GPR61Q9BZJ8 451 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 NECAP2Q9NVZ3 263 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 PRELID3BQ9Y3B1 194 aa10.5□□□□□ -0.73
SENP3-209ENST00000610454 SMIM31A0A1B0GVY4 71 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 A0A1W2PN81 502 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 XRCC3O43542 346 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 TUSC2O75896 110 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 CNIH1O95406 144 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 CA2P00918 260 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 IGLL1P15814 213 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 PSMB8P28062 276 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 CHRNA7P36544 502 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 CDX1P47902 265 aaPredicted RBP10.49□□□□□ -0.73
SENP3-209ENST00000610454 NCS1P62166 190 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 C18orf65Q6ZTR6 163 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 KCTD9Q7L273 389 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 HOGA1Q86XE5 327 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 RNF152Q8N8N0 203 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 BVESQ8NE79 360 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 WFDC9Q8NEX5 89 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 DPF1Q92782 380 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 DCUN1D5Q9BTE7 237 aa10.49□□□□□ -0.73
SENP3-209ENST00000610454 MRPS26Q9BYN8 205 aaKnown RBP10.49□□□□□ -0.73
SENP3-209ENST00000610454 FOXA2Q9Y261 457 aaPredicted RBP10.49□□□□□ -0.73
SENP3-209ENST00000610454 MRPS7Q9Y2R9 242 aaKnown RBP10.49□□□□□ -0.73
SENP3-209ENST00000610454 CCL24O00175 119 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 FCN1O00602 326 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 CRYZL1O95825 349 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 HLA-DQB1P01920 261 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 DUTP33316 252 aaKnown RBP10.48□□□□□ -0.73
SENP3-209ENST00000610454 GNB1P62873 340 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 VMA21Q3ZAQ7 101 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 PYHIN1Q6K0P9 492 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 UNQ5815/PRO19632Q6UWF5 114 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 ZNF562Q6V9R5 426 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 REC114Q7Z4M0 266 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 PPP1R27Q86WC6 154 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 MRPL41Q8IXM3 137 aaKnown RBP10.48□□□□□ -0.73
SENP3-209ENST00000610454 GVQW1Q8N7I0 195 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 LINC00482Q8N8I6 264 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 GRPEL2Q8TAA5 225 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 C4orf3Q8WVX3 66 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 ACOT12Q8WYK0 555 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 ARPC1AQ92747 370 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 MCRIP2Q9BUT9 160 aaKnown RBP10.48□□□□□ -0.73
SENP3-209ENST00000610454 COMMD3Q9UBI1 195 aa10.48□□□□□ -0.73
SENP3-209ENST00000610454 MEIS3P1A6NDR6 274 aa10.47□□□□□ -0.73
SENP3-209ENST00000610454 CREBL2O60519 120 aaPredicted RBP10.47□□□□□ -0.73
SENP3-209ENST00000610454 FCER2P06734 321 aa10.47□□□□□ -0.73
SENP3-209ENST00000610454 SMIM18P0DKX4 95 aa10.47□□□□□ -0.73
SENP3-209ENST00000610454 PPIFP30405 207 aaKnown RBP10.47□□□□□ -0.73
SENP3-209ENST00000610454 FCGR2CP31995 323 aa10.47□□□□□ -0.73
SENP3-209ENST00000610454 RORCP51449 518 aa10.47□□□□□ -0.73
SENP3-209ENST00000610454 CRIP2P52943 208 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms