RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 PTGDSP41222 190 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 ERVFRD-1P60508 538 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 CCDC144NLQ6NUI1 221 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 C5orf17Q8NAS9 161 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 MESP1Q9BRJ9 268 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 TLNRD1Q9H1K6 362 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 SH3BGRL3Q9H299 93 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 TMEM140Q9NV12 185 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 SNURFLB1AK76 121 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 ZNF708P17019 499 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 MEF2BQ02080 365 aaPredicted RBP12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 TNFRSF9Q07011 255 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 PAXXQ9BUH6 204 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 IL19Q9UHD0 177 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 HILPDAQ9Y5L2 63 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 CEACAM18A8MTB9 384 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 PRR32B1ATL7 298 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 ZG16O60844 167 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 MELTFP08582 738 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 ZNF273Q14593 569 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 SLC25A53Q5H9E4 307 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 FAM90A26D6RGX4 464 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 EIF3GO75821 320 aaKnown RBP eCLIP12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 RPL8P62917 257 aaKnown RBP12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 CALHM1Q8IU99 346 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 MC5RP33032 325 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 DRAM1Q8N682 238 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 SGMS2Q8NHU3 365 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 TM2D1Q9BX74 207 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 IDI2-AS1Q9NZ38 188 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 IL36RNQ9UBH0 155 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 WASHC3Q9Y3C0 194 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 IGKV3-7A0A075B6H7 116 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 J3QW42 95 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 M0R2Z0 102 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 NDUFB4O95168 129 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 HSPB1P04792 205 aaKnown RBP12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 SSTR5P35346 364 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 HIST3H3Q16695 136 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 MIC13Q5XKP0 118 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 TMEM171Q8WVE6 324 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 HCP5Q6MZN7 132 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 UFC1Q9Y3C8 167 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 WNT9BO14905 357 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 HYPMO75409 117 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 CCKARP32238 428 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 RNF151Q2KHN1 245 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 MRPL13Q9BYD1 178 aaKnown RBP12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 JPT1Q9UK76 154 aa12.17□□□□□ -0.46
PCDHB16-201ENST00000609684 LINC00869P0C866 280 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 SMIM6P0DI80 62 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 C2orf68Q2NKX9 166 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 SFXN3Q9BWM7 321 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 PTBP3O95758 552 aaKnown RBP12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 ORM1P02763 201 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 IGFBP3P17936 291 aaPredicted RBP12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 FHITP49789 147 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 VWA1Q6PCB0 445 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 OR2D3Q8NGH3 330 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 HIGD1AQ9Y241 93 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 SIP14410 1827 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 TEX50A0A1B0GTY4 177 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 H0YL77 283 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 NPIPB7O75200 414 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 TRPM7Q96QT4 1865 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 MED12Q93074 2177 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 TCAPO15273 167 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 RHBDL1O75783 438 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 FAM87AP0C7U9 286 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 HIST1H1EP10412 219 aaKnown RBP12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 KIF26BQ2KJY2 2108 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 LRP11Q86VZ4 500 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 LSM10Q969L4 123 aaKnown RBP12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 GP6Q9HCN6 339 aa12.16□□□□□ -0.46
PCDHB16-201ENST00000609684 J3QRE1 110 aa12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 CFHR1Q03591 330 aa12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 OR5R1Q8NH85 324 aa12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 PITPNC1Q9UKF7 332 aa12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 J3KRW8 73 aa12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 PLAUP00749 431 aa12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 HIST1H1BP16401 226 aaKnown RBP12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 HSPE1P61604 102 aaKnown RBP12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 RARRES2Q99969 163 aa12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 MSGN1A6NI15 193 aa12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 SMPD2O60906 423 aa12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 SRP14P37108 136 aaKnown RBP12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 VKORC1L1Q8N0U8 176 aa12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 LILRB1Q8NHL6 650 aaPredicted RBP12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 RAB24Q969Q5 203 aa12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 STARD4Q96DR4 205 aa12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 POM121Q96HA1 1249 aa12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 METTL1Q9UBP6 276 aaKnown RBP12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 RIF1Q5UIP0 2472 aaKnown RBP12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 ZNF646O15015 1829 aaPredicted RBP12.15□□□□□ -0.46
PCDHB16-201ENST00000609684 RALGAPA1Q6GYQ0 2036 aa12.15□□□□□ -0.47
PCDHB16-201ENST00000609684 SLC25A17O43808 307 aa12.15□□□□□ -0.47
PCDHB16-201ENST00000609684 DANCRP0C864 163 aa12.15□□□□□ -0.47
PCDHB16-201ENST00000609684 SHISA5Q8N114 240 aa12.15□□□□□ -0.47
PCDHB16-201ENST00000609684 MDC1Q14676 2089 aaKnown RBP12.14□□□□□ -0.47
PCDHB16-201ENST00000609684 LOC102723996A0A087X1L8 192 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms