RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 SH3BGRL3Q9H299 93 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 GLS2Q9UI32 602 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 PRNDQ9UKY0 176 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 FGD6Q6ZV73 1430 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 YLPM1P49750 1951 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 BCL9LQ86UU0 1499 aa2.39□□□□□ -2.03
SMCHD1-213ENST00000609587 DOCK9Q9BZ29 2069 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 CABIN1Q9Y6J0 2220 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 DHX57Q6P158 1386 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 ZNF608Q9ULD9 1512 aaPredicted RBP2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 VIRMAQ69YN4 1812 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 IGHV7-4-1A0A0J9YVY3 117 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 A0A1B0GX51 115 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 ARL5CA6NH57 179 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 SIGLEC16A6NMB1 481 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 EEF1E1-BLOC1S5C9J1V9 151 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 TRAPPC2LH3BP13 241 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 CYB5BO43169 146 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 EEF1E1O43324 174 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 CCDC22O60826 627 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 GADD45GO95257 159 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 IGLV3-25P01717 112 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 IGHV3-11P01762 117 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 IFNA4P05014 189 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 S100A8P05109 93 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 ATP5G1P05496 136 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 CD79AP11912 226 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 CXCL3P19876 107 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 MARCKSL1P49006 195 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 KLF3P57682 345 aaPredicted RBP2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 RPS24P62847 133 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 BAMBIQ13145 260 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 PNOCQ13519 176 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 PMAIP1Q13794 54 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 PMVKQ15126 192 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 TTC32Q5I0X7 151 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 CLEC12AQ5QGZ9 265 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 DNLZQ5SXM8 178 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 SPATA31B1PQ5VZV4 182 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 KDM4DQ6B0I6 523 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 ZFAND6Q6FIF0 208 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 OOSP2Q86WS3 158 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 ZCCHC24Q8N2G6 241 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 OR51A2Q8NGJ7 313 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 OR1J4Q8NGS1 313 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 OR4C6Q8NH72 309 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 GRPEL2Q8TAA5 225 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 RTN4IP1Q8WWV3 396 aaPredicted RBP2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 DNAJC9Q8WXX5 260 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 ACOT12Q8WYK0 555 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 TMEM131Q92545 1883 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 RMI2Q96E14 147 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 CAPZA3Q96KX2 299 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 UBQLN4Q9NRR5 601 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 DNAJC27Q9NZQ0 273 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 GRIN2BQ13224 1484 aa2.38□□□□□ -2.03
SMCHD1-213ENST00000609587 PCM1Q15154 2024 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 DOCK3Q8IZD9 2030 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 BAZ2AQ9UIF9 1905 aaKnown RBP2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 TNS3Q68CZ2 1445 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 IGHV3-72A0A0B4J1Y9 119 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 FAM236DA0A1B0GTK5 79 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 RBFOX3A6NFN3 312 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 FAM183AA6NL82 134 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 FAM25AB3EWG3 89 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 FAM25CB3EWG5 89 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 FAM25GB3EWG6 89 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 FFAR1O14842 300 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 RGS5O15539 181 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 BANF1O75531 89 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 TNFSF15O95150 251 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 CA2P00918 260 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 MMP7P09237 267 aaPredicted RBP2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 FAM236CP0DP71 79 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 ZNF14P17017 642 aaPredicted RBP2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 SPI1P17947 270 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 PSMB9P28065 219 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 SRIP30626 198 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 CD70P32970 193 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 POLR2IP36954 125 aaKnown RBP2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 H2BFSP57053 126 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 MTPNP58546 118 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 HBG1P69891 147 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 HBG2P69892 147 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 SLC35A2P78381 396 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 RNASE10Q5GAN6 216 aaKnown RBP2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 FAM201AQ5SY85 155 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 DCUN1D2Q6PH85 259 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 MDP1Q86V88 176 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 DEFB125Q8N687 156 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 SLC35G3Q8N808 338 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 OR11H6Q8NGC7 330 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 OR4M1Q8NGD0 313 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 OR13C4Q8NGS5 318 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 GNPDA2Q8TDQ7 276 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 CCL17Q92583 94 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 DCUN1D1Q96GG9 259 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 CCDC115Q96NT0 180 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 HSPB9Q9BQS6 159 aa2.37□□□□□ -2.03
SMCHD1-213ENST00000609587 EFCAB11Q9BUY7 163 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms