RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 CX3CL1P78423 397 aa11.28□□□□□ -0.6
PKNOX1-210ENST00000607049 DCTN2Q13561 401 aaKnown RBP11.28□□□□□ -0.6
PKNOX1-210ENST00000607049 PSG5Q15238 335 aa11.28□□□□□ -0.6
PKNOX1-210ENST00000607049 ECSCRQ19T08 205 aa11.28□□□□□ -0.6
PKNOX1-210ENST00000607049 ZNF562Q6V9R5 426 aa11.28□□□□□ -0.6
PKNOX1-210ENST00000607049 ETV3LQ6ZN32 361 aa11.28□□□□□ -0.6
PKNOX1-210ENST00000607049 NR2C2APQ86WQ0 139 aa11.28□□□□□ -0.6
PKNOX1-210ENST00000607049 CROCCP3Q8IVE0 287 aa11.28□□□□□ -0.6
PKNOX1-210ENST00000607049 MAFIPQ8WZ33 124 aa11.28□□□□□ -0.6
PKNOX1-210ENST00000607049 RAX2Q96IS3 184 aa11.28□□□□□ -0.6
PKNOX1-210ENST00000607049 P2RX4Q99571 388 aa11.28□□□□□ -0.6
PKNOX1-210ENST00000607049 AURKAIP1Q9NWT8 199 aaPredicted RBP11.28□□□□□ -0.6
PKNOX1-210ENST00000607049 RHBDL2Q9NX52 303 aa11.28□□□□□ -0.6
PKNOX1-210ENST00000607049 FOXA2Q9Y261 457 aaPredicted RBP11.28□□□□□ -0.6
PKNOX1-210ENST00000607049 A3GALT2U3KPV4 340 aa11.28□□□□□ -0.6
PKNOX1-210ENST00000607049 A0A087WXM4 84 aa11.27□□□□□ -0.61
PKNOX1-210ENST00000607049 G3V318 75 aa11.27□□□□□ -0.61
PKNOX1-210ENST00000607049 SLC22A5O76082 557 aa11.27□□□□□ -0.61
PKNOX1-210ENST00000607049 TNFAIP8O95379 198 aa11.27□□□□□ -0.61
PKNOX1-210ENST00000607049 CNIH1O95406 144 aa11.27□□□□□ -0.61
PKNOX1-210ENST00000607049 SNRPBP14678 240 aaKnown RBP11.27□□□□□ -0.61
PKNOX1-210ENST00000607049 IDNKQ5T6J7 187 aa11.27□□□□□ -0.61
PKNOX1-210ENST00000607049 C18orf65Q6ZTR6 163 aa11.27□□□□□ -0.61
PKNOX1-210ENST00000607049 PPP1R27Q86WC6 154 aa11.27□□□□□ -0.61
PKNOX1-210ENST00000607049 ZNF383Q8NA42 475 aa11.27□□□□□ -0.61
PKNOX1-210ENST00000607049 LGALS14Q8TCE9 139 aa11.27□□□□□ -0.61
PKNOX1-210ENST00000607049 RBMXL1Q96E39 390 aaKnown RBP11.27□□□□□ -0.61
PKNOX1-210ENST00000607049 CLCC1Q96S66 551 aa11.27□□□□□ -0.61
PKNOX1-210ENST00000607049 DIABLOQ9NR28 239 aa11.27□□□□□ -0.61
PKNOX1-210ENST00000607049 SDHAF2Q9NX18 166 aa11.27□□□□□ -0.61
PKNOX1-210ENST00000607049 A0A0A6YYH2 397 aa11.26□□□□□ -0.61
PKNOX1-210ENST00000607049 A0A1W2PN81 502 aa11.26□□□□□ -0.61
PKNOX1-210ENST00000607049 A6NJ64 397 aa11.26□□□□□ -0.61
PKNOX1-210ENST00000607049 SHOXO15266 292 aa11.26□□□□□ -0.61
PKNOX1-210ENST00000607049 IGLV1-40P01703 118 aa11.26□□□□□ -0.61
PKNOX1-210ENST00000607049 IGKV1-16P04430 117 aa11.26□□□□□ -0.61
PKNOX1-210ENST00000607049 OR8U8P0C7N1 319 aa11.26□□□□□ -0.61
PKNOX1-210ENST00000607049 PPIFP30405 207 aaKnown RBP11.26□□□□□ -0.61
PKNOX1-210ENST00000607049 CHRNA7P36544 502 aa11.26□□□□□ -0.61
PKNOX1-210ENST00000607049 RAB9AP51151 201 aa11.26□□□□□ -0.61
PKNOX1-210ENST00000607049 AKIRIN2Q53H80 203 aa11.26□□□□□ -0.61
PKNOX1-210ENST00000607049 ACTBL2Q562R1 376 aa11.26□□□□□ -0.61
PKNOX1-210ENST00000607049 UNQ5815/PRO19632Q6UWF5 114 aa11.26□□□□□ -0.61
PKNOX1-210ENST00000607049 MINDY2Q8NBR6 621 aa11.26□□□□□ -0.61
PKNOX1-210ENST00000607049 HARBI1Q96MB7 349 aa11.26□□□□□ -0.61
PKNOX1-210ENST00000607049 DUX3Q96PT4 197 aa11.26□□□□□ -0.61
PKNOX1-210ENST00000607049 TMEM235A6NFC5 223 aa11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 SLC25A17O43808 307 aa11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 LUMP51884 338 aaPredicted RBP11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 CRIP2P52943 208 aaPredicted RBP11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 ARPC4P59998 168 aa11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 DEFB136Q30KP8 78 aa11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 DEFB121Q5J5C9 76 aa11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 C9orf66Q5T8R8 295 aa11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 CNIH2Q6PI25 160 aa11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 H1FOOQ8IZA3 346 aaPredicted RBP11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 ZNF491Q8N8L2 437 aa11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 TSPAN14Q8NG11 270 aa11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 OR11H1Q8NG94 326 aa11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 OR1N2Q8NGR9 330 aa11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 ARPC1AQ92747 370 aa11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 SLA2Q9H6Q3 261 aa11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 PRELID3BQ9Y3B1 194 aa11.25□□□□□ -0.61
PKNOX1-210ENST00000607049 FCN1O00602 326 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 AIREO43918 545 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 CREBL2O60519 120 aaPredicted RBP11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 RAMP3O60896 148 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 PROP1O75360 226 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 CA2P00918 260 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 HOXD3P31249 432 aaPredicted RBP11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 GNB1P62873 340 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 RUNX1Q01196 453 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 ZNF616Q08AN1 781 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 EGFEM1PQ0D2K5 195 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 FXYD3Q14802 87 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 VMA21Q3ZAQ7 101 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 ZNF260Q3ZCT1 412 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 GRPEL2Q8TAA5 225 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 NUDCD2Q8WVJ2 157 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 TMEM68Q96MH6 324 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 KLK15Q9H2R5 256 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 ZNF355PQ9NSJ1 428 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 MRPS7Q9Y2R9 242 aaKnown RBP11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 OR2W1Q9Y3N9 320 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 NUBP2Q9Y5Y2 271 aa11.24□□□□□ -0.61
PKNOX1-210ENST00000607049 TRAV18A0A075B6X5 111 aa11.23□□□□□ -0.61
PKNOX1-210ENST00000607049 SEC14L6B5MCN3 397 aa11.23□□□□□ -0.61
PKNOX1-210ENST00000607049 ACTL6BO94805 426 aa11.23□□□□□ -0.61
PKNOX1-210ENST00000607049 DGCR2P98153 550 aa11.23□□□□□ -0.61
PKNOX1-210ENST00000607049 ZNF645Q8N7E2 425 aa11.23□□□□□ -0.61
PKNOX1-210ENST00000607049 BVESQ8NE79 360 aa11.23□□□□□ -0.61
PKNOX1-210ENST00000607049 LFNGQ8NES3 379 aa11.23□□□□□ -0.61
PKNOX1-210ENST00000607049 OSR1Q8TAX0 266 aaPredicted RBP11.23□□□□□ -0.61
PKNOX1-210ENST00000607049 MYOZ3Q8TDC0 251 aa11.23□□□□□ -0.61
PKNOX1-210ENST00000607049 S100A16Q96FQ6 103 aaKnown RBP11.23□□□□□ -0.61
PKNOX1-210ENST00000607049 OR5B12Q96R08 314 aa11.23□□□□□ -0.61
PKNOX1-210ENST00000607049 DCUN1D5Q9BTE7 237 aa11.23□□□□□ -0.61
PKNOX1-210ENST00000607049 ANXA10Q9UJ72 324 aa11.23□□□□□ -0.61
PKNOX1-210ENST00000607049 ELF5Q9UKW6 265 aaPredicted RBP11.23□□□□□ -0.61
PKNOX1-210ENST00000607049 TGP01266 2768 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms