RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 PRH1P02810 166 aa8.76□□□□□ -1.01
PDLIM1P1-201ENST00000604187 IGFBP3P17936 291 aaPredicted RBP8.76□□□□□ -1.01
PDLIM1P1-201ENST00000604187 FASP25445 335 aa8.76□□□□□ -1.01
PDLIM1P1-201ENST00000604187 GNGT1P63211 74 aa8.76□□□□□ -1.01
PDLIM1P1-201ENST00000604187 ATP5G2Q06055 141 aa8.76□□□□□ -1.01
PDLIM1P1-201ENST00000604187 XAF1Q6GPH4 301 aa8.76□□□□□ -1.01
PDLIM1P1-201ENST00000604187 OR13C5Q8NGS8 318 aa8.76□□□□□ -1.01
PDLIM1P1-201ENST00000604187 KCNG3Q8TAE7 436 aa8.76□□□□□ -1.01
PDLIM1P1-201ENST00000604187 FAM46BQ96A09 425 aa8.76□□□□□ -1.01
PDLIM1P1-201ENST00000604187 OR14A2Q96R54 314 aa8.76□□□□□ -1.01
PDLIM1P1-201ENST00000604187 SULT4A1Q9BR01 284 aa8.76□□□□□ -1.01
PDLIM1P1-201ENST00000604187 CKLFQ9UBR5 152 aa8.76□□□□□ -1.01
PDLIM1P1-201ENST00000604187 OAZ3Q9UMX2 235 aa8.76□□□□□ -1.01
PDLIM1P1-201ENST00000604187 HERC1Q15751 4861 aa8.75□□□□□ -1.01
PDLIM1P1-201ENST00000604187 TRAV8-7A0A075B6U6 113 aa8.75□□□□□ -1.01
PDLIM1P1-201ENST00000604187 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.75□□□□□ -1.01
PDLIM1P1-201ENST00000604187 FAM223BA6NKX1 122 aa8.75□□□□□ -1.01
PDLIM1P1-201ENST00000604187 PPP5D1E7EU14 171 aa8.75□□□□□ -1.01
PDLIM1P1-201ENST00000604187 PROP1O75360 226 aa8.75□□□□□ -1.01
PDLIM1P1-201ENST00000604187 IGLV2-23P01705 113 aa8.75□□□□□ -1.01
PDLIM1P1-201ENST00000604187 OR9G9P0C7N8 305 aa8.75□□□□□ -1.01
PDLIM1P1-201ENST00000604187 APOC4P55056 127 aa8.75□□□□□ -1.01
PDLIM1P1-201ENST00000604187 TM4SF20Q53R12 229 aa8.75□□□□□ -1.01
PDLIM1P1-201ENST00000604187 ZNF57Q68EA5 555 aaPredicted RBP8.75□□□□□ -1.01
PDLIM1P1-201ENST00000604187 FAM223AQ8IWN6 122 aa8.75□□□□□ -1.01
PDLIM1P1-201ENST00000604187 SVOPQ8N4V2 548 aa8.75□□□□□ -1.01
PDLIM1P1-201ENST00000604187 C11orf54Q9H0W9 315 aaPredicted RBP8.75□□□□□ -1.01
PDLIM1P1-201ENST00000604187 OR1A1Q9P1Q5 309 aa8.75□□□□□ -1.01
PDLIM1P1-201ENST00000604187 MPPED1O15442 326 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 GYG2O15488 501 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 OR2C1O95371 312 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 CRYGBP07316 175 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 CBLN1P23435 193 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 CAPGP40121 348 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 GYS2P54840 703 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 ZNF45Q02386 682 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 ANKRD55Q3KP44 614 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 RPL22L1Q6P5R6 122 aaKnown RBP8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 LINC00336Q6ZUF6 198 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 SETD6Q8TBK2 473 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 FBLIM1Q8WUP2 373 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 EDARADDQ8WWZ3 215 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 RNF183Q96D59 192 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 HARBI1Q96MB7 349 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 KRTAP4-5Q9BYR2 181 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 CHMP1AQ9HD42 196 aaPredicted RBP8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 AMBNQ9NP70 447 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 SLC35D1Q9NTN3 355 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 MLXQ9UH92 298 aa8.74□□□□□ -1.01
PDLIM1P1-201ENST00000604187 A0A1B0GVY2 172 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 SAC3D1A6NKF1 404 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 M0R1X1 148 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 LGALS9O00182 355 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 ITGB1BP1O14713 200 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 GGCTO75223 188 aaKnown RBP8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 LIMS3P0CW19 117 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 LIMS4P0CW20 117 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 CTRB1P17538 263 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 CEACAM6P40199 344 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 NANOS2P60321 138 aaKnown RBP8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 DNAL1Q4LDG9 190 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 CCDC58Q4VC31 144 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 CTRB2Q6GPI1 263 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 BTNL8Q6UX41 500 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 NEDD4LQ96PU5 975 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 FAAP24Q9BTP7 215 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 FBXL17Q9UF56 701 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 ZNF221Q9UK13 617 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 DMRT1Q9Y5R6 373 aa8.73□□□□□ -1.01
PDLIM1P1-201ENST00000604187 TRBV9A0A0B4J1U6 114 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 TRBV5-5A0A0J9YX44 114 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 ZNF320A2RRD8 509 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 TMEM213A2RRL7 107 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 UBE2CO00762 179 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 XRCC3O43542 346 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 NAPSAO96009 420 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 ZBTB25P24278 435 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 TNXAQ16473 311 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 MRGPRG-AS1Q2M3A8 158 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 C15orf32Q32M92 178 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 MOB1BQ7L9L4 216 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 C6orf201Q7Z4U5 140 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 STPG3Q8N7X2 389 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 UXS1Q8NBZ7 420 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 NECAP1Q8NC96 275 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 OR52I1Q8NGK6 324 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 OR1L6Q8NGR2 347 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 SRSF12Q8WXF0 261 aaKnown RBP8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 SMIM19Q96E16 107 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 EXOSC1Q9Y3B2 195 aaKnown RBP8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 AP4S1Q9Y587 144 aa8.72□□□□□ -1.01
PDLIM1P1-201ENST00000604187 A0A1W2PPK0 400 aa8.71□□□□□ -1.02
PDLIM1P1-201ENST00000604187 OR2J3O76001 311 aa8.71□□□□□ -1.02
PDLIM1P1-201ENST00000604187 IFNA4P05014 189 aa8.71□□□□□ -1.02
PDLIM1P1-201ENST00000604187 FCGR1AP12314 374 aa8.71□□□□□ -1.02
PDLIM1P1-201ENST00000604187 GABRB1P18505 474 aa8.71□□□□□ -1.02
PDLIM1P1-201ENST00000604187 RBMS2Q15434 407 aaKnown RBP8.71□□□□□ -1.02
PDLIM1P1-201ENST00000604187 PRSS8Q16651 343 aa8.71□□□□□ -1.02
PDLIM1P1-201ENST00000604187 ZIK1Q3SY52 487 aaPredicted RBP8.71□□□□□ -1.02
PDLIM1P1-201ENST00000604187 Q499Y3 187 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms