RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ZNF850A8MQ14 1090 aa7.51□□□□□ -1.21
COMMD3-215ENST00000602574 CT45A6P0DMU7 189 aa7.51□□□□□ -1.21
COMMD3-215ENST00000602574 CT45A5P0DMU8 189 aa7.51□□□□□ -1.21
COMMD3-215ENST00000602574 CT45A7P0DMV0 189 aa7.51□□□□□ -1.21
COMMD3-215ENST00000602574 RBMXP38159 391 aaKnown RBP7.51□□□□□ -1.21
COMMD3-215ENST00000602574 TGFBR3Q03167 851 aa7.51□□□□□ -1.21
COMMD3-215ENST00000602574 CT45A1Q5HYN5 189 aa7.51□□□□□ -1.21
COMMD3-215ENST00000602574 ZNF474Q6S9Z5 364 aaPredicted RBP7.51□□□□□ -1.21
COMMD3-215ENST00000602574 SHISA5Q8N114 240 aa7.51□□□□□ -1.21
COMMD3-215ENST00000602574 CT45A3Q8NHU0 189 aa7.51□□□□□ -1.21
COMMD3-215ENST00000602574 OR4C12Q96R67 309 aa7.51□□□□□ -1.21
COMMD3-215ENST00000602574 SFXN3Q9BWM7 321 aa7.51□□□□□ -1.21
COMMD3-215ENST00000602574 MRPL32Q9BYC8 188 aaKnown RBP7.51□□□□□ -1.21
COMMD3-215ENST00000602574 GNB4Q9HAV0 340 aa7.51□□□□□ -1.21
COMMD3-215ENST00000602574 BCL2L10Q9HD36 194 aa7.51□□□□□ -1.21
COMMD3-215ENST00000602574 ZNF835Q9Y2P0 537 aa7.51□□□□□ -1.21
COMMD3-215ENST00000602574 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.5□□□□□ -1.21
COMMD3-215ENST00000602574 MYBPHLA2RUH7 354 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 LRRC30A6NM36 301 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 RIIAD1A6NNX1 92 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 FOXI3A8MTJ6 420 aaPredicted RBP7.5□□□□□ -1.21
COMMD3-215ENST00000602574 CCDC179H3BU77 68 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 VDAC2P45880 294 aaPredicted RBP7.5□□□□□ -1.21
COMMD3-215ENST00000602574 ATP5G2Q06055 141 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 FOXI1Q12951 378 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 HSPB3Q12988 150 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 ZNF77Q15935 545 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 ZNF550Q7Z398 422 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 TRAPPC6BQ86SZ2 158 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 ENY2Q9NPA8 101 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 RABAC1Q9UI14 185 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 RCL1Q9Y2P8 373 aaKnown RBP7.5□□□□□ -1.21
COMMD3-215ENST00000602574 SOX21Q9Y651 276 aaPredicted RBP7.5□□□□□ -1.21
COMMD3-215ENST00000602574 TRBV5-4A0A0C4DH59 114 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 ZC3H12DA2A288 527 aaKnown RBP7.5□□□□□ -1.21
COMMD3-215ENST00000602574 FAM90A26D6RGX4 464 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 CCL22O00626 93 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 HIST1H1CP16403 213 aaKnown RBP7.5□□□□□ -1.21
COMMD3-215ENST00000602574 XGP55808 180 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 FXYD6P3P58550 94 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 KIR3DS1Q14943 382 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 CCL15Q16663 113 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 HLA-DQA1Q5Y7H0 255 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 ZNF627Q7L945 461 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 OSR1Q8TAX0 266 aaPredicted RBP7.5□□□□□ -1.21
COMMD3-215ENST00000602574 NAT6Q93015 286 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 PAAF1Q9BRP4 392 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 S1PR5Q9H228 398 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 C11orf1Q9H5F2 150 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 HES4Q9HCC6 221 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 PRSS16Q9NQE7 514 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 MDFICQ9P1T7 246 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 HEBP2Q9Y5Z4 205 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 KCNE3Q9Y6H6 103 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 TMEM131Q92545 1883 aa7.5□□□□□ -1.21
COMMD3-215ENST00000602574 MED19A0JLT2 244 aaPredicted RBP7.49□□□□□ -1.21
COMMD3-215ENST00000602574 CEBPZOSA8MTT3 80 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 SYS1-DBNDD2H3BUS1 97 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 MT-CO3P00414 261 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 IGLV3-27P01718 113 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 RHOCP08134 193 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 MRPL3P09001 348 aaKnown RBP7.49□□□□□ -1.21
COMMD3-215ENST00000602574 ZGLP1P0C6A0 271 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 SP9P0CG40 484 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 PVRP15151 417 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 IL9P15248 144 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 GLRXP35754 106 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 RAE1P78406 368 aaKnown RBP7.49□□□□□ -1.21
COMMD3-215ENST00000602574 TAF10Q12962 218 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 IHHQ14623 411 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 FNDC7Q5VTL7 733 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 C17orf99Q6UX52 265 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 HAPLN4Q86UW8 402 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 TPRX1Q8N7U7 411 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 OR51A4Q8NGJ6 313 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 KCNK17Q96T54 332 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 IL23AQ9NPF7 189 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 PRTFDC1Q9NRG1 225 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 CKLFQ9UBR5 152 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 COA3Q9Y2R0 106 aaPredicted RBP7.49□□□□□ -1.21
COMMD3-215ENST00000602574 A0A1W2PRD5 423 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 A0A1W2PRF3 423 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 A0A1W2PRM7 423 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 ZFP92A6NM28 416 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 M0QZQ0 153 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 LDB3O75112 727 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 HPNP05981 417 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 FAM106CPP0CH98 169 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 COX8AP10176 69 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 ATP1B2P14415 290 aaPredicted RBP7.49□□□□□ -1.21
COMMD3-215ENST00000602574 RTP5Q14D33 572 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 POM121L1PQ3SYA9 428 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 FAM106AQ4KMX7 169 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 ASTLQ6HA08 431 aaPredicted RBP7.49□□□□□ -1.21
COMMD3-215ENST00000602574 SLC25A47Q6Q0C1 308 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 RBPMS2Q6ZRY4 209 aaKnown RBP7.49□□□□□ -1.21
COMMD3-215ENST00000602574 C2orf91Q6ZV80 131 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 C1QL2Q7Z5L3 287 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 BPIFA4PQ86YQ2 179 aa7.49□□□□□ -1.21
COMMD3-215ENST00000602574 LRTM2Q8N967 370 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms