RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 CCL28Q9NRJ3 127 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 HSPB7Q9UBY9 170 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 AGAP20933 346 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 ZP1P60852 638 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 C10orf111Q8N326 155 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 M0R296 226 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 PSG2P11465 335 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 AMMECR1LQ6DCA0 310 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 ASCL4Q6XD76 172 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 OR2I1PQ8NGU4 316 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 OR6X1Q8NH79 312 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 CISD1Q9NZ45 108 aaKnown RBP7.57□□□□□ -1.2
CSMD1-216ENST00000602557 IGHV1OR21-1A0A087WYE8 117 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 OR4A8P0C604 315 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 HOXA5P20719 270 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 MMDQ15546 238 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 BHLHA15Q7RTS1 189 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-216ENST00000602557 PLAC1Q9HBJ0 212 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 ZNF324O75467 553 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-216ENST00000602557 STXBP6Q8NFX7 210 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 KLK15Q9H2R5 256 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 PTX4Q96A99 478 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 SDHCQ99643 169 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-216ENST00000602557 CXXC4Q9H2H0 198 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 SLC52A3Q9NQ40 469 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 SFTPA2Q8IWL1 248 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 SMDT1Q9H4I9 107 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 TCF20Q9UGU0 1960 aaKnown RBP7.57□□□□□ -1.2
CSMD1-216ENST00000602557 PTPRQQ9UMZ3 2332 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 A0A1W2PRS3 328 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 HRKO00198 91 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 F2RL2O00254 374 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 ARL14EPLP0DKL9 152 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 C21orf58P58505 322 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 SRSF4Q08170 494 aaKnown RBP7.57□□□□□ -1.2
CSMD1-216ENST00000602557 VN1R4Q7Z5H5 301 aa7.57□□□□□ -1.2
CSMD1-216ENST00000602557 SFTPCP11686 197 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 KCNS1Q96KK3 526 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 PGLYRP3Q96LB9 341 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 GREB1LQ9C091 1923 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-216ENST00000602557 IGHV3OR15-7A0A075B7D8 119 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 RBKSQ9H477 322 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 FSCN3Q9NQT6 498 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 MT-ND6P03923 174 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 RPL30P62888 115 aaKnown RBP7.56□□□□□ -1.2
CSMD1-216ENST00000602557 COL24A1Q17RW2 1714 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 TRAV8-2A0A0B4J237 113 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 IGHV4-34P06331 123 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 COX6CP09669 75 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 FAM216AQ8WUB2 273 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 ZNF107Q9UII5 783 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-216ENST00000602557 MED13Q9UHV7 2174 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 C1QTNF9BB2RNN3 333 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 PNLIPP16233 465 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 MAS1LP35410 378 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 SOX8P57073 446 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 C10orf113Q5VZT2 155 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 DGAT2L7PQ6IED9 249 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 TMUB1Q9BVT8 246 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 ZNF71Q9NQZ8 489 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-216ENST00000602557 HBZP02008 142 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 OR10W1Q8NGF6 305 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 TMEM70Q9BUB7 260 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 BRWD3Q6RI45 1802 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 KIAA0040Q15053 153 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 TCF23Q7RTU1 214 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 MOGAT3Q86VF5 341 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 SNRNP40Q96DI7 357 aaKnown RBP7.56□□□□□ -1.2
CSMD1-216ENST00000602557 RPP25Q9BUL9 199 aaKnown RBP7.56□□□□□ -1.2
CSMD1-216ENST00000602557 SORL1Q92673 2214 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 PRSS8Q16651 343 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 C2orf68Q2NKX9 166 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 TMEM177Q53S58 311 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 DLEU1O43261 78 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 LGALS7P47929 136 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 SCAND1P57086 179 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 MESTQ5EB52 335 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 WDR34Q96EX3 536 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 ZNF414Q96IQ9 312 aa7.56□□□□□ -1.2
CSMD1-216ENST00000602557 LIPT2A6NK58 231 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 ATXN7O15265 892 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-216ENST00000602557 RASL11BQ9BPW5 248 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 DANCRP0C864 163 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 MRPS11P82912 194 aaKnown RBP7.55□□□□□ -1.2
CSMD1-216ENST00000602557 SELENOHQ8IZQ5 122 aaKnown RBP7.55□□□□□ -1.2
CSMD1-216ENST00000602557 GPBAR1Q8TDU6 330 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 RAB1BQ9H0U4 201 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 IGKV3-7A0A075B6H7 116 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 IGHV3-21A0A0B4J1V1 117 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 ZNF735P0CB33 412 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 SSPNQ14714 243 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 C3AR1Q16581 482 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 OR4X1Q8NH49 305 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 CXorf51AA0A1B0GTR3 108 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 APOMO95445 188 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 ECSCRQ19T08 205 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 C8orf82Q6P1X6 216 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-216ENST00000602557 SLC23A3Q6PIS1 610 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 OR2V2Q96R30 315 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 TUBD1Q9UJT1 453 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms