RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 UBE2E2Q96LR5 201 aa7.68□□□□□ -1.18
HIF3A-219ENST00000600879 SULT4A1Q9BR01 284 aa7.68□□□□□ -1.18
HIF3A-219ENST00000600879 PTTG2Q9NZH5 202 aa7.68□□□□□ -1.18
HIF3A-219ENST00000600879 ZNF107Q9UII5 783 aaPredicted RBP7.68□□□□□ -1.18
HIF3A-219ENST00000600879 IGHV4OR15-8A0A075B7B6 117 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 A0A087WW49 117 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 TMEM30CPA0ZSE6 113 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 MFNGO00587 321 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 MOSP00540 346 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 GSTP1P09211 210 aaKnown RBP7.67□□□□□ -1.18
HIF3A-219ENST00000600879 CD3GP09693 182 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 GNB3P16520 340 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 TNFSF8P32971 234 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 TAS2R20P59543 309 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 MRPS15P82914 257 aaKnown RBP7.67□□□□□ -1.18
HIF3A-219ENST00000600879 ARFRP1Q13795 201 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 HAGHQ16775 308 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 CNIH2Q6PI25 160 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 SGPP2Q8IWX5 399 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 DIRAS2Q96HU8 199 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 CMSS1Q9BQ75 279 aaKnown RBP7.67□□□□□ -1.18
HIF3A-219ENST00000600879 RSRP1Q9BUV0 290 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 GHITMQ9H3K2 345 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 CHMP1AQ9HD42 196 aaPredicted RBP7.67□□□□□ -1.18
HIF3A-219ENST00000600879 PARP11Q9NR21 331 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 C19orf73Q9NVV2 129 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 AK3Q9UIJ7 227 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 MRPS7Q9Y2R9 242 aaKnown RBP7.67□□□□□ -1.18
HIF3A-219ENST00000600879 RYR1P21817 5038 aa7.67□□□□□ -1.18
HIF3A-219ENST00000600879 IGHV3-43A0A0B4J1X8 118 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 TMEM235A6NFC5 223 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 LINC01619G3V211 115 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 ATP6V0E1O15342 81 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 CA11O75493 328 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 LY6G6CO95867 125 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 IFNA6P05013 189 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 IGF1P05019 195 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 IGHV3-43DP0DP04 118 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 PPIFP30405 207 aaKnown RBP7.66□□□□□ -1.18
HIF3A-219ENST00000600879 GNG2P59768 71 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 PITPNAQ00169 270 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 RUNX1Q01196 453 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 IL18Q14116 193 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 RSBN1Q5VWQ0 802 aaPredicted RBP7.66□□□□□ -1.18
HIF3A-219ENST00000600879 ACSM6Q6P461 480 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 ZNF497Q6ZNH5 498 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 FAM71E2Q8N5Q1 922 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 OR4K15Q8NH41 348 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 SETD6Q8TBK2 473 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 RTN4IP1Q8WWV3 396 aaPredicted RBP7.66□□□□□ -1.18
HIF3A-219ENST00000600879 OR4C12Q96R67 309 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 HDHD3Q9BSH5 251 aaPredicted RBP7.66□□□□□ -1.18
HIF3A-219ENST00000600879 AUNIPQ9H7T9 357 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 ELF5Q9UKW6 265 aaPredicted RBP7.66□□□□□ -1.18
HIF3A-219ENST00000600879 KCNK7Q9Y2U2 307 aa7.66□□□□□ -1.18
HIF3A-219ENST00000600879 NPIPB11E5RHQ5 1161 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 SLC31A2O15432 143 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 IGHV3-11P01762 117 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 MT-ND4P03905 459 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 OR8U9P0C7N5 309 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 OR5H8P0DN80 308 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 PTHLHP12272 177 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 CD1BP29016 333 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 RAB9AP51151 201 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 HACD4Q5VWC8 232 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 FAM131AQ6UXB0 335 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 SNX29P2Q8IUI4 249 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 MRPL30Q8TCC3 161 aaKnown RBP7.65□□□□□ -1.18
HIF3A-219ENST00000600879 CCDC107Q8WV48 283 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 NUDCD2Q8WVJ2 157 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 DDB2Q92466 427 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 OR51J1Q9H342 316 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 C12orf4Q9NQ89 552 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 TRAPPC2LQ9UL33 140 aa7.65□□□□□ -1.18
HIF3A-219ENST00000600879 TRAV41A0A0B4J266 112 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 FABP12A6NFH5 140 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 SDCBPO00560 298 aaPredicted RBP7.64□□□□□ -1.19
HIF3A-219ENST00000600879 SLC25A17O43808 307 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 IGLV1-40P01703 118 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 HLA-DQB1P01920 261 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 CNTFRP26992 372 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 PRSS3P35030 304 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 PAX5Q02548 391 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 MMDQ15546 238 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 ECSCRQ19T08 205 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 RNASE12Q5GAN4 147 aaKnown RBP7.64□□□□□ -1.19
HIF3A-219ENST00000600879 PYHIN1Q6K0P9 492 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 CCDC190Q86UF4 302 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 GAPTQ8N292 157 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 RPP25LQ8N5L8 163 aaKnown RBP7.64□□□□□ -1.19
HIF3A-219ENST00000600879 C15orf40Q8WUR7 153 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 LINC00476Q8WZB0 136 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 TOLLIPQ9H0E2 274 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 RIMS4Q9H426 269 aaPredicted RBP7.64□□□□□ -1.19
HIF3A-219ENST00000600879 NCOR1P1Q9H4R4 102 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 LINC00574Q9H8X3 128 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 RABL2AQ9UBK7 228 aaPredicted RBP7.64□□□□□ -1.19
HIF3A-219ENST00000600879 RABL2BQ9UNT1 228 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 KIAA1109Q2LD37 5005 aa7.64□□□□□ -1.19
HIF3A-219ENST00000600879 A0A1W2PN81 502 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms