RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	FXYD4	P59646	89 aa		10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523	RPS16	P62249	146 aa	Known RBP	10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523	SLC35B1	P78383	322 aa		10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523	DYRK1A	Q13627	763 aa		10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523	MSMO1	Q15800	293 aa		10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523	GLDN	Q6ZMI3	551 aa	Predicted RBP	10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523	OVCH2	Q7RTZ1	564 aa		10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523	SLC35E3	Q7Z769	313 aa		10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523	CENPV	Q7Z7K6	275 aa	Predicted RBP	10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523		Q8N6K4	173 aa		10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523	KLHDC1	Q8N7A1	406 aa		10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523	HSD17B10	Q99714	261 aa	Known RBP	10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523	SLC5A7	Q9GZV3	580 aa		10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523	MIXL1	Q9H2W2	232 aa		10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523	TAS2R8	Q9NYW2	309 aa		10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523	ANAPC10	Q9UM13	185 aa		10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523	SIGLEC9	Q9Y336	463 aa		10.36	□□□□□ -0.75
SRRM1-223	ENST00000600523	HRH1	P35367	487 aa		10.35	□□□□□ -0.75
SRRM1-223	ENST00000600523	RFX2	P48378	723 aa		10.35	□□□□□ -0.75
SRRM1-223	ENST00000600523	TAS2R19	P59542	299 aa		10.35	□□□□□ -0.75
SRRM1-223	ENST00000600523	CATR1	Q13166	79 aa		10.35	□□□□□ -0.75
SRRM1-223	ENST00000600523	RNASE12	Q5GAN4	147 aa	Known RBP	10.35	□□□□□ -0.75
SRRM1-223	ENST00000600523	RNASE10	Q5GAN6	216 aa	Known RBP	10.35	□□□□□ -0.75
SRRM1-223	ENST00000600523	LPCAT3	Q6P1A2	487 aa		10.35	□□□□□ -0.75
SRRM1-223	ENST00000600523	KCTD9	Q7L273	389 aa		10.35	□□□□□ -0.75
SRRM1-223	ENST00000600523	CMTM1	Q8IZ96	169 aa		10.35	□□□□□ -0.75
SRRM1-223	ENST00000600523	ZNF383	Q8NA42	475 aa		10.35	□□□□□ -0.75
SRRM1-223	ENST00000600523	POC5	Q8NA72	575 aa		10.35	□□□□□ -0.75
SRRM1-223	ENST00000600523	SGMS2	Q8NHU3	365 aa		10.35	□□□□□ -0.75
SRRM1-223	ENST00000600523	ZNF2	Q9BSG1	426 aa	Predicted RBP	10.35	□□□□□ -0.75
SRRM1-223	ENST00000600523	NXF2	Q9GZY0	626 aa	Known RBP	10.35	□□□□□ -0.75
SRRM1-223	ENST00000600523	MTFP1	Q9UDX5	166 aa		10.35	□□□□□ -0.75
SRRM1-223	ENST00000600523	RBMX2	Q9Y388	322 aa	Known RBP	10.35	□□□□□ -0.75
SRRM1-223	ENST00000600523	AP4M1	O00189	453 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	SHOX	O15266	292 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	SPDEF	O95238	335 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	AMY1A	P04745	511 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	AMY2A	P04746	511 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	TNFSF8	P32971	234 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	LGALS7	P47929	136 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	SPANXN2	Q5MJ10	180 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	LIN54	Q6MZP7	749 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	DHRS11	Q6UWP2	260 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	ZNF66	Q6ZN08	573 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523		Q8N9W7	124 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	NPB	Q8NG41	125 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	OR4X2	Q8NGF9	303 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	OR52I2	Q8NH67	350 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	CHPT1	Q8WUD6	406 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	TCTEX1D2	Q8WW35	142 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	ABHD1	Q96SE0	405 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	AIFM2	Q9BRQ8	373 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	SERTAD4	Q9NUC0	356 aa		10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523	ZNF107	Q9UII5	783 aa	Predicted RBP	10.34	□□□□□ -0.75
SRRM1-223	ENST00000600523		M0QZ24	198 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	RRH	O14718	337 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	CTDSPL	O15194	276 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	CREBL2	O60519	120 aa	Predicted RBP	10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	FBXO24	O75426	580 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	IGHG2	P01859	326 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	CSF1	P09603	554 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	VDAC1	P21796	283 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	DUT	P33316	252 aa	Known RBP	10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	KIR2DS2	P43631	304 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	F2RL1	P55085	397 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	MEF2D	Q14814	521 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	C5orf64	Q2M2E5	130 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	FBLN7	Q53RD9	439 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	LYSMD2	Q8IV50	215 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	ARRDC1	Q8N5I2	433 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	FAM71E2	Q8N5Q1	922 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	BVES	Q8NE79	360 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	OR4S2	Q8NH73	311 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	SMIM4	Q8WVI0	70 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	MOB3A	Q96BX8	217 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	HARBI1	Q96MB7	349 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	PLSCR3	Q9NRY6	295 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	KLK11	Q9UBX7	282 aa		10.33	□□□□□ -0.76
SRRM1-223	ENST00000600523	IGKV1D-13	A0A0B4J2D9	117 aa		10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	PSMB11	A5LHX3	300 aa		10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	DPPA5	A6NC42	116 aa		10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	SH2D7	A6NKC9	451 aa	Predicted RBP	10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	FCGR3B	O75015	233 aa		10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	PROP1	O75360	226 aa		10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	CRYZL1	O95825	349 aa		10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	HLA-DRB1	P01911	266 aa		10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	IGKV1-13	P0DP09	117 aa		10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	PTBP1	P26599	531 aa	Known RBP eCLIP	10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	VMA21	Q3ZAQ7	101 aa		10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	PYDC2	Q56P42	97 aa		10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	VAX1	Q5SQQ9	334 aa		10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523		Q6ZS46	218 aa		10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	TMEM229B	Q8NBD8	167 aa		10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	OR5AU1	Q8NGC0	362 aa		10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	OSR1	Q8TAX0	266 aa	Predicted RBP	10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	CITED1	Q99966	193 aa		10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	CCL28	Q9NRJ3	127 aa		10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	METTL1	Q9UBP6	276 aa	Known RBP	10.32	□□□□□ -0.76
SRRM1-223	ENST00000600523	NDUFA3	O95167	84 aa		10.31	□□□□□ -0.76
SRRM1-223	ENST00000600523	RAB3D	O95716	219 aa		10.31	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms