RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 PITPNAQ00169 270 aa11.19□□□□□ -0.62
IRF3-224ENST00000599680 TAGLNQ01995 201 aaKnown RBP11.19□□□□□ -0.62
IRF3-224ENST00000599680 SRSF7Q16629 238 aaKnown RBP eCLIP11.19□□□□□ -0.62
IRF3-224ENST00000599680 TCTEX1D1Q8N7M0 179 aa11.19□□□□□ -0.62
IRF3-224ENST00000599680 ZNF383Q8NA42 475 aa11.19□□□□□ -0.62
IRF3-224ENST00000599680 UBE2E2Q96LR5 201 aa11.19□□□□□ -0.62
IRF3-224ENST00000599680 ST6GALNAC5Q9BVH7 336 aa11.19□□□□□ -0.62
IRF3-224ENST00000599680 TOLLIPQ9H0E2 274 aa11.19□□□□□ -0.62
IRF3-224ENST00000599680 VCX3AQ9NNX9 186 aa11.19□□□□□ -0.62
IRF3-224ENST00000599680 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.19□□□□□ -0.62
IRF3-224ENST00000599680 FOXA2Q9Y261 457 aaPredicted RBP11.19□□□□□ -0.62
IRF3-224ENST00000599680 VSIG4Q9Y279 399 aa11.19□□□□□ -0.62
IRF3-224ENST00000599680 FCN1O00602 326 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 SLC25A17O43808 307 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 PROP1O75360 226 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 CA2P00918 260 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 IGLV1-40P01703 118 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 IGKV1-16P04430 117 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 LINC00205P59089 165 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 NDPQ00604 133 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 RTL8BQ17RB0 113 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 DEFB121Q5J5C9 76 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 IDNKQ5T6J7 187 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 HACD4Q5VWC8 232 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 UNQ5815/PRO19632Q6UWF5 114 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 Q6ZS49 121 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 PPP1R27Q86WC6 154 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 ZNF491Q8N8L2 437 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 OR11H1Q8NG94 326 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 OR5B12Q96R08 314 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 KLK15Q9H2R5 256 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 SDHAF2Q9NX18 166 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 RHBDL2Q9NX52 303 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 ELF5Q9UKW6 265 aaPredicted RBP11.18□□□□□ -0.62
IRF3-224ENST00000599680 FBXO7Q9Y3I1 522 aa11.18□□□□□ -0.62
IRF3-224ENST00000599680 TMEM235A6NFC5 223 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 CNIH1O95406 144 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 CTXN2P0C2S0 81 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 RRASP10301 218 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 RAB9AP51151 201 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 KRTAP10-11P60412 298 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 GNB1P62873 340 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 EGFEM1PQ0D2K5 195 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 TIMM50Q3ZCQ8 353 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 ACTBL2Q562R1 376 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 C9orf66Q5T8R8 295 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 PYHIN1Q6K0P9 492 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 MINDY2Q8NBR6 621 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 MYOZ3Q8TDC0 251 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 NUDCD2Q8WVJ2 157 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 ARPC1AQ92747 370 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 ADTRPQ96IZ2 230 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 HARBI1Q96MB7 349 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 FAM103A1Q9BTL3 118 aaKnown RBP11.17□□□□□ -0.62
IRF3-224ENST00000599680 DCSTAMPQ9H295 470 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 RNF167Q9H6Y7 350 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 GNB4Q9HAV0 340 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 GAB2Q9UQC2 676 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 ETV7Q9Y603 341 aa11.17□□□□□ -0.62
IRF3-224ENST00000599680 SHOXO15266 292 aa11.16□□□□□ -0.62
IRF3-224ENST00000599680 CLEC2LP0C7M8 214 aa11.16□□□□□ -0.62
IRF3-224ENST00000599680 OR8U8P0C7N1 319 aa11.16□□□□□ -0.62
IRF3-224ENST00000599680 LGALS7P47929 136 aa11.16□□□□□ -0.62
IRF3-224ENST00000599680 CRIP2P52943 208 aaPredicted RBP11.16□□□□□ -0.62
IRF3-224ENST00000599680 SCAND1P57086 179 aa11.16□□□□□ -0.62
IRF3-224ENST00000599680 ZNF616Q08AN1 781 aa11.16□□□□□ -0.62
IRF3-224ENST00000599680 ZNF562Q6V9R5 426 aa11.16□□□□□ -0.62
IRF3-224ENST00000599680 H1FOOQ8IZA3 346 aaPredicted RBP11.16□□□□□ -0.62
IRF3-224ENST00000599680 BVESQ8NE79 360 aa11.16□□□□□ -0.62
IRF3-224ENST00000599680 OR1N2Q8NGR9 330 aa11.16□□□□□ -0.62
IRF3-224ENST00000599680 GRPEL2Q8TAA5 225 aa11.16□□□□□ -0.62
IRF3-224ENST00000599680 NUBP2Q9Y5Y2 271 aa11.16□□□□□ -0.62
IRF3-224ENST00000599680 IGKV1D-8A0A087WSZ0 117 aa11.15□□□□□ -0.62
IRF3-224ENST00000599680 SEC14L6B5MCN3 397 aa11.15□□□□□ -0.62
IRF3-224ENST00000599680 J3QRK9 145 aa11.15□□□□□ -0.62
IRF3-224ENST00000599680 K7EIL1 84 aa11.15□□□□□ -0.62
IRF3-224ENST00000599680 TNFAIP8O95379 198 aa11.15□□□□□ -0.62
IRF3-224ENST00000599680 LUMP51884 338 aaPredicted RBP11.15□□□□□ -0.62
IRF3-224ENST00000599680 DGCR2P98153 550 aa11.15□□□□□ -0.62
IRF3-224ENST00000599680 RUNX1Q01196 453 aa11.15□□□□□ -0.62
IRF3-224ENST00000599680 DCTN2Q13561 401 aaKnown RBP11.15□□□□□ -0.62
IRF3-224ENST00000599680 FXYD3Q14802 87 aa11.15□□□□□ -0.62
IRF3-224ENST00000599680 AKIRIN2Q53H80 203 aa11.15□□□□□ -0.62
IRF3-224ENST00000599680 LFNGQ8NES3 379 aa11.15□□□□□ -0.62
IRF3-224ENST00000599680 DIABLOQ9NR28 239 aa11.15□□□□□ -0.62
IRF3-224ENST00000599680 TPSG1Q9NRR2 321 aa11.15□□□□□ -0.62
IRF3-224ENST00000599680 ZNF355PQ9NSJ1 428 aa11.15□□□□□ -0.62
IRF3-224ENST00000599680 TRAV18A0A075B6X5 111 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 A0A087WXM4 84 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 WI2-2373I1.2A0A1W2PRP0 233 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 I3L521 148 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 SLC22A5O76082 557 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 TPPP2P59282 170 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 ARPC4P59998 168 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 FHL3Q13643 280 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 VMA21Q3ZAQ7 101 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 ZNF260Q3ZCT1 412 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 TMEM177Q53S58 311 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 C19orf54Q5BKX5 351 aa11.14□□□□□ -0.63
IRF3-224ENST00000599680 CNIH2Q6PI25 160 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms