RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 MSMO1Q15800 293 aa12.08□□□□□ -0.48
TRIM28-207ENST00000597136 PHLDA2Q53GA4 152 aa12.08□□□□□ -0.48
TRIM28-207ENST00000597136 MINDY2Q8NBR6 621 aa12.08□□□□□ -0.48
TRIM28-207ENST00000597136 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.08□□□□□ -0.48
TRIM28-207ENST00000597136 PIFOQ8TCI5 191 aa12.08□□□□□ -0.48
TRIM28-207ENST00000597136 ST6GALNAC6Q969X2 333 aa12.08□□□□□ -0.48
TRIM28-207ENST00000597136 MALSU1Q96EH3 234 aa12.08□□□□□ -0.48
TRIM28-207ENST00000597136 ZNF486Q96H40 463 aaPredicted RBP12.08□□□□□ -0.48
TRIM28-207ENST00000597136 ZNF251Q9BRH9 671 aa12.08□□□□□ -0.48
TRIM28-207ENST00000597136 MARVELD1Q9BSK0 173 aa12.08□□□□□ -0.48
TRIM28-207ENST00000597136 CHIAQ9BZP6 476 aa12.08□□□□□ -0.48
TRIM28-207ENST00000597136 C14orf166Q9Y224 244 aaKnown RBP12.08□□□□□ -0.48
TRIM28-207ENST00000597136 ABCA11PQ4W5N1 156 aa12.07□□□□□ -0.48
TRIM28-207ENST00000597136 RPL39P5Q59GN2 51 aa12.07□□□□□ -0.48
TRIM28-207ENST00000597136 TMED4Q7Z7H5 227 aa12.07□□□□□ -0.48
TRIM28-207ENST00000597136 CMTM1Q8IZ96 169 aa12.07□□□□□ -0.48
TRIM28-207ENST00000597136 CENPSQ8N2Z9 138 aa12.07□□□□□ -0.48
TRIM28-207ENST00000597136 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.07□□□□□ -0.48
TRIM28-207ENST00000597136 ZBTB34Q8NCN2 500 aa12.07□□□□□ -0.48
TRIM28-207ENST00000597136 ADAD2Q8NCV1 583 aaKnown RBP12.07□□□□□ -0.48
TRIM28-207ENST00000597136 AKR1E2Q96JD6 320 aa12.07□□□□□ -0.48
TRIM28-207ENST00000597136 JMJD8Q96S16 334 aa12.07□□□□□ -0.48
TRIM28-207ENST00000597136 SLC2A9Q9NRM0 540 aa12.07□□□□□ -0.48
TRIM28-207ENST00000597136 DPM3Q9P2X0 92 aa12.07□□□□□ -0.48
TRIM28-207ENST00000597136 AMMECR1Q9Y4X0 333 aaPredicted RBP12.07□□□□□ -0.48
TRIM28-207ENST00000597136 H3BUX3 64 aa12.06□□□□□ -0.48
TRIM28-207ENST00000597136 IL3RAP26951 378 aa12.06□□□□□ -0.48
TRIM28-207ENST00000597136 PIGPP57054 158 aa12.06□□□□□ -0.48
TRIM28-207ENST00000597136 RAB25P57735 213 aa12.06□□□□□ -0.48
TRIM28-207ENST00000597136 RND3P61587 244 aa12.06□□□□□ -0.48
TRIM28-207ENST00000597136 EIF4EBP1Q13541 118 aaPredicted RBP12.06□□□□□ -0.48
TRIM28-207ENST00000597136 MINOS1Q5TGZ0 78 aa12.06□□□□□ -0.48
TRIM28-207ENST00000597136 ZNF833PQ6ZTB9 187 aa12.06□□□□□ -0.48
TRIM28-207ENST00000597136 SLC25A42Q86VD7 318 aa12.06□□□□□ -0.48
TRIM28-207ENST00000597136 SSMEM1Q8WWF3 244 aa12.06□□□□□ -0.48
TRIM28-207ENST00000597136 GPHA2Q96T91 129 aa12.06□□□□□ -0.48
TRIM28-207ENST00000597136 S1PR3Q99500 378 aa12.06□□□□□ -0.48
TRIM28-207ENST00000597136 MINOS1-NBL1R4GNA1 71 aa12.06□□□□□ -0.48
TRIM28-207ENST00000597136 INMT-MINDY4F8WBC2 141 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 TRIM77I1YAP6 450 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 TNFSF12O43508 249 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 PEX14O75381 377 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 PGLYRP1O75594 196 aaPredicted RBP12.05□□□□□ -0.48
TRIM28-207ENST00000597136 ANXA7P20073 488 aaKnown RBP12.05□□□□□ -0.48
TRIM28-207ENST00000597136 MECP2P51608 486 aaKnown RBP12.05□□□□□ -0.48
TRIM28-207ENST00000597136 RAG2P55895 527 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 LY6EQ16553 131 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 TMEM230Q96A57 120 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 LEUTXA8MZ59 168 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 CLDN34H7C241 214 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 M0R1X1 148 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 MPPED1O15442 326 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 RNASE1P07998 156 aaKnown RBP12.05□□□□□ -0.48
TRIM28-207ENST00000597136 AKR1C4P17516 323 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 CD24P25063 80 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 S100GP29377 79 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 LRRC75BQ2VPJ9 315 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 KRTAP21-3Q3LHN1 58 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 FBLN7Q53RD9 439 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 TMEM128Q5BJH2 165 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 TPTE2P1Q5T6R2 138 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 FAM71F2Q6NXP2 309 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 DRAXINQ8NBI3 349 aaPredicted RBP12.05□□□□□ -0.48
TRIM28-207ENST00000597136 RTN4IP1Q8WWV3 396 aaPredicted RBP12.05□□□□□ -0.48
TRIM28-207ENST00000597136 RBMXL1Q96E39 390 aaKnown RBP12.05□□□□□ -0.48
TRIM28-207ENST00000597136 ALX4Q9H161 411 aaPredicted RBP12.05□□□□□ -0.48
TRIM28-207ENST00000597136 BEX1Q9HBH7 125 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 POMT1Q9Y6A1 747 aa12.05□□□□□ -0.48
TRIM28-207ENST00000597136 FAM181BA6NEQ2 426 aa12.04□□□□□ -0.48
TRIM28-207ENST00000597136 RNF212BA8MTL3 300 aa12.04□□□□□ -0.48
TRIM28-207ENST00000597136 VSIG10L2P0DP72 767 aa12.04□□□□□ -0.48
TRIM28-207ENST00000597136 CEACAM3P40198 252 aa12.04□□□□□ -0.48
TRIM28-207ENST00000597136 REG1BP48304 166 aa12.04□□□□□ -0.48
TRIM28-207ENST00000597136 LINC00205P59089 165 aa12.04□□□□□ -0.48
TRIM28-207ENST00000597136 TAS2R31P59538 309 aa12.04□□□□□ -0.48
TRIM28-207ENST00000597136 DHODHQ02127 395 aa12.04□□□□□ -0.48
TRIM28-207ENST00000597136 ZNF66Q6ZN08 573 aa12.04□□□□□ -0.48
TRIM28-207ENST00000597136 TBC1D26Q86UD7 250 aa12.04□□□□□ -0.48
TRIM28-207ENST00000597136 CCDC71LQ8N9Z2 235 aa12.04□□□□□ -0.48
TRIM28-207ENST00000597136 CAPSLQ8WWF8 208 aa12.04□□□□□ -0.48
TRIM28-207ENST00000597136 HSD17B10Q99714 261 aaKnown RBP12.04□□□□□ -0.48
TRIM28-207ENST00000597136 TEX13DA0A0J9YY54 714 aaPredicted RBP12.03□□□□□ -0.48
TRIM28-207ENST00000597136 CRYM-AS1A6NIL9 109 aa12.03□□□□□ -0.48
TRIM28-207ENST00000597136 LINC00473A8K010 186 aa12.03□□□□□ -0.48
TRIM28-207ENST00000597136 GAPDHP04406 335 aaKnown RBP12.03□□□□□ -0.48
TRIM28-207ENST00000597136 CT45A6P0DMU7 189 aa12.03□□□□□ -0.48
TRIM28-207ENST00000597136 CT45A5P0DMU8 189 aa12.03□□□□□ -0.48
TRIM28-207ENST00000597136 CT45A7P0DMV0 189 aa12.03□□□□□ -0.48
TRIM28-207ENST00000597136 DUTP33316 252 aaKnown RBP12.03□□□□□ -0.48
TRIM28-207ENST00000597136 UBE2MP61081 183 aaKnown RBP12.03□□□□□ -0.48
TRIM28-207ENST00000597136 RPL30P62888 115 aaKnown RBP12.03□□□□□ -0.48
TRIM28-207ENST00000597136 SUPT4H1P63272 117 aaKnown RBP12.03□□□□□ -0.48
TRIM28-207ENST00000597136 ZNF816Q0VGE8 651 aaPredicted RBP12.03□□□□□ -0.48
TRIM28-207ENST00000597136 TGIF2LXQ8IUE1 241 aa12.03□□□□□ -0.48
TRIM28-207ENST00000597136 TMEM86BQ8N661 226 aa12.03□□□□□ -0.48
TRIM28-207ENST00000597136 TMEM158Q8WZ71 300 aa12.03□□□□□ -0.48
TRIM28-207ENST00000597136 RPEQ96AT9 228 aa12.03□□□□□ -0.48
TRIM28-207ENST00000597136 C19orf24Q9BVV8 132 aa12.03□□□□□ -0.48
TRIM28-207ENST00000597136 MRPL20Q9BYC9 149 aaKnown RBP12.03□□□□□ -0.48
TRIM28-207ENST00000597136 VGLL3A8MV65 326 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms