RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 KCNIP1Q9NZI2 227 aa13.85□□□□□ -0.19
LIG1-206ENST00000594067 GPR179Q6PRD1 2367 aa13.85□□□□□ -0.19
LIG1-206ENST00000594067 DIDO1Q9BTC0 2240 aaKnown RBP13.84□□□□□ -0.19
LIG1-206ENST00000594067 C12orf77C9JDV5 145 aa13.84□□□□□ -0.19
LIG1-206ENST00000594067 PPP5D1E7EU14 171 aa13.84□□□□□ -0.19
LIG1-206ENST00000594067 UBE2NP61088 152 aaKnown RBP13.84□□□□□ -0.19
LIG1-206ENST00000594067 MRPL49Q13405 166 aaKnown RBP13.84□□□□□ -0.19
LIG1-206ENST00000594067 RTP5Q14D33 572 aa13.84□□□□□ -0.19
LIG1-206ENST00000594067 CLEC12BQ2HXU8 276 aa13.84□□□□□ -0.19
LIG1-206ENST00000594067 PCGF1Q9BSM1 259 aa13.84□□□□□ -0.19
LIG1-206ENST00000594067 SLC25A22Q9H936 323 aa13.84□□□□□ -0.19
LIG1-206ENST00000594067 LNP1A1A4G5 178 aa13.84□□□□□ -0.19
LIG1-206ENST00000594067 FAM90A26D6RGX4 464 aa13.84□□□□□ -0.19
LIG1-206ENST00000594067 H7BYZ3 331 aa13.84□□□□□ -0.19
LIG1-206ENST00000594067 S1PR2O95136 353 aa13.84□□□□□ -0.19
LIG1-206ENST00000594067 SNRPCP09234 159 aaKnown RBP13.84□□□□□ -0.19
LIG1-206ENST00000594067 PDLIM4P50479 330 aa13.84□□□□□ -0.19
LIG1-206ENST00000594067 AESQ08117 197 aa13.84□□□□□ -0.19
LIG1-206ENST00000594067 BTNL3Q6UXE8 466 aa13.84□□□□□ -0.19
LIG1-206ENST00000594067 GCNT2Q8N0V5 402 aa13.84□□□□□ -0.19
LIG1-206ENST00000594067 GALMQ96C23 342 aa13.84□□□□□ -0.19
LIG1-206ENST00000594067 NDUFAF3Q9BU61 184 aa13.84□□□□□ -0.19
LIG1-206ENST00000594067 KNTC1P50748 2209 aa13.83□□□□□ -0.19
LIG1-206ENST00000594067 TMEM30CPA0ZSE6 113 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 ODAMA1E959 279 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 TMEM250H0YL14 139 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 GCGP01275 180 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 CD46P15529 392 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 IGHV1-2P23083 117 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 MPV17P39210 176 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 NUBP1P53384 320 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 TMEM170AQ8WVE7 144 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 PARLQ9H300 379 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 OBP2BQ9NPH6 170 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 HSPB7Q9UBY9 170 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 TP53TG5Q9Y2B4 290 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 ZNF705GA8MUZ8 300 aaPredicted RBP13.83□□□□□ -0.2
LIG1-206ENST00000594067 ZNF883P0CG24 379 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 RAC2P15153 192 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 SSX2Q16385 188 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 ZNF766Q5HY98 468 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 OR5B12Q96R08 314 aa13.83□□□□□ -0.2
LIG1-206ENST00000594067 GTF3C1Q12789 2109 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 C17orf98A8MV24 154 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 ZNF124Q15973 351 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 SPINK9Q5DT21 86 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 TMPRSS7Q7RTY8 843 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 BEND2Q8NDZ0 799 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 GATAD1Q8WUU5 269 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 TMEM37Q8WXS4 190 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 ZDHHC16Q969W1 377 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 ACY3Q96HD9 319 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 GUCD1Q96NT3 240 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 A0A1W2PPQ1 181 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 LRRC30A6NM36 301 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 ZG16O60844 167 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 HBZP02008 142 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 FAM3BP58499 235 aaPredicted RBP13.82□□□□□ -0.2
LIG1-206ENST00000594067 LINC00205P59089 165 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 PMP22Q01453 160 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 MSMO1Q15800 293 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 MRGPRDQ8TDS7 321 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 LURAP1Q96LR2 239 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 COLQQ9Y215 455 aaPredicted RBP13.82□□□□□ -0.2
LIG1-206ENST00000594067 TIMM9Q9Y5J7 89 aa13.82□□□□□ -0.2
LIG1-206ENST00000594067 IQCF6A8MYZ5 107 aa13.81□□□□□ -0.2
LIG1-206ENST00000594067 HRASP01112 189 aa13.81□□□□□ -0.2
LIG1-206ENST00000594067 PSMB3P49720 205 aa13.81□□□□□ -0.2
LIG1-206ENST00000594067 BRWD1-AS2P59051 145 aa13.81□□□□□ -0.2
LIG1-206ENST00000594067 TPRX1Q8N7U7 411 aa13.81□□□□□ -0.2
LIG1-206ENST00000594067 J3QW42 95 aa13.81□□□□□ -0.2
LIG1-206ENST00000594067 P0C879 139 aa13.81□□□□□ -0.2
LIG1-206ENST00000594067 GABRA2P47869 451 aa13.81□□□□□ -0.2
LIG1-206ENST00000594067 ARG2P78540 354 aa13.81□□□□□ -0.2
LIG1-206ENST00000594067 TFF3Q07654 80 aa13.81□□□□□ -0.2
LIG1-206ENST00000594067 USF2Q15853 346 aaPredicted RBP13.81□□□□□ -0.2
LIG1-206ENST00000594067 PRSS8Q16651 343 aa13.81□□□□□ -0.2
LIG1-206ENST00000594067 FIP1L1Q6UN15 594 aaKnown RBP13.81□□□□□ -0.2
LIG1-206ENST00000594067 Q6ZR03 302 aa13.81□□□□□ -0.2
LIG1-206ENST00000594067 TGIF2LXQ8IUE1 241 aa13.81□□□□□ -0.2
LIG1-206ENST00000594067 KLF14Q8TD94 323 aaPredicted RBP13.81□□□□□ -0.2
LIG1-206ENST00000594067 FER1L6-AS2Q96M78 137 aa13.81□□□□□ -0.2
LIG1-206ENST00000594067 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.81□□□□□ -0.2
LIG1-206ENST00000594067 FUT9Q9Y231 359 aa13.81□□□□□ -0.2
LIG1-206ENST00000594067 IGHV3-43A0A0B4J1X8 118 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 MLNRO43193 412 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 TNFSF15O95150 251 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 IGHV3-43DP0DP04 118 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 SPCS3P61009 180 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 DHRS13Q6UX07 377 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 OR10G9Q8NGN4 311 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 OR10G7Q8NGN6 311 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 NINJ1Q92982 152 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 COQ2Q96H96 371 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 TMEM147Q9BVK8 224 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 RBMXL2O75526 392 aaKnown RBP13.8□□□□□ -0.2
LIG1-206ENST00000594067 AGFG2O95081 481 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 EIF4EBP1Q13541 118 aaPredicted RBP13.8□□□□□ -0.2
LIG1-206ENST00000594067 GABRA6Q16445 453 aa13.8□□□□□ -0.2
LIG1-206ENST00000594067 ACTL10Q5JWF8 245 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms