RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 PITPNAQ00169 270 aa11.92□□□□□ -0.5
TRIM28-203ENST00000593582 NDPQ00604 133 aa11.92□□□□□ -0.5
TRIM28-203ENST00000593582 TAGLNQ01995 201 aaKnown RBP11.92□□□□□ -0.5
TRIM28-203ENST00000593582 TMEM267Q0VDI3 215 aaPredicted RBP11.92□□□□□ -0.5
TRIM28-203ENST00000593582 ECSCRQ19T08 205 aa11.92□□□□□ -0.5
TRIM28-203ENST00000593582 MINDY2Q8NBR6 621 aa11.92□□□□□ -0.5
TRIM28-203ENST00000593582 MYOZ3Q8TDC0 251 aa11.92□□□□□ -0.5
TRIM28-203ENST00000593582 UBE2E2Q96LR5 201 aa11.92□□□□□ -0.5
TRIM28-203ENST00000593582 ST6GALNAC5Q9BVH7 336 aa11.92□□□□□ -0.5
TRIM28-203ENST00000593582 KLK15Q9H2R5 256 aa11.92□□□□□ -0.5
TRIM28-203ENST00000593582 SLC35D1Q9NTN3 355 aa11.92□□□□□ -0.5
TRIM28-203ENST00000593582 SDHAF2Q9NX18 166 aa11.92□□□□□ -0.5
TRIM28-203ENST00000593582 ELF5Q9UKW6 265 aaPredicted RBP11.92□□□□□ -0.5
TRIM28-203ENST00000593582 A3GALT2U3KPV4 340 aa11.92□□□□□ -0.5
TRIM28-203ENST00000593582 HOXD3P31249 432 aaPredicted RBP11.91□□□□□ -0.5
TRIM28-203ENST00000593582 RAB9AP51151 201 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 CRIP2P52943 208 aaPredicted RBP11.91□□□□□ -0.5
TRIM28-203ENST00000593582 SCAND1P57086 179 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 GNG2P59768 71 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 EGFEM1PQ0D2K5 195 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 CBX3Q13185 183 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 TIMM50Q3ZCQ8 353 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 IDNKQ5T6J7 187 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 ZNF562Q6V9R5 426 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 TCTEX1D1Q8N7M0 179 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 OR5M8Q8NGP6 311 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 CLCC1Q96S66 551 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 DCSTAMPQ9H295 470 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 RNF167Q9H6Y7 350 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 VCX3AQ9NNX9 186 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 RHBDL2Q9NX52 303 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 FOXA2Q9Y261 457 aaPredicted RBP11.91□□□□□ -0.5
TRIM28-203ENST00000593582 VSIG4Q9Y279 399 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 FBXO7Q9Y3I1 522 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 ETV7Q9Y603 341 aa11.91□□□□□ -0.5
TRIM28-203ENST00000593582 IGKV1D-8A0A087WSZ0 117 aa11.9□□□□□ -0.5
TRIM28-203ENST00000593582 A0A1W2PN81 502 aa11.9□□□□□ -0.5
TRIM28-203ENST00000593582 TMEM235A6NFC5 223 aa11.9□□□□□ -0.5
TRIM28-203ENST00000593582 CTXN2P0C2S0 81 aa11.9□□□□□ -0.5
TRIM28-203ENST00000593582 CLEC2LP0C7M8 214 aa11.9□□□□□ -0.5
TRIM28-203ENST00000593582 CHRNA7P36544 502 aa11.9□□□□□ -0.5
TRIM28-203ENST00000593582 LGALS7P47929 136 aa11.9□□□□□ -0.5
TRIM28-203ENST00000593582 KRTAP10-11P60412 298 aa11.9□□□□□ -0.5
TRIM28-203ENST00000593582 RTL8BQ17RB0 113 aa11.9□□□□□ -0.5
TRIM28-203ENST00000593582 PPP1R27Q86WC6 154 aa11.9□□□□□ -0.5
TRIM28-203ENST00000593582 H1FOOQ8IZA3 346 aaPredicted RBP11.9□□□□□ -0.5
TRIM28-203ENST00000593582 ZNF491Q8N8L2 437 aa11.9□□□□□ -0.5
TRIM28-203ENST00000593582 OR11H1Q8NG94 326 aa11.9□□□□□ -0.5
TRIM28-203ENST00000593582 NUDCD2Q8WVJ2 157 aa11.9□□□□□ -0.5
TRIM28-203ENST00000593582 ZMAT5Q9UDW3 170 aaKnown RBP11.9□□□□□ -0.5
TRIM28-203ENST00000593582 SLC25A17O43808 307 aa11.89□□□□□ -0.51
TRIM28-203ENST00000593582 TNFAIP8O95379 198 aa11.89□□□□□ -0.51
TRIM28-203ENST00000593582 CA2P00918 260 aa11.89□□□□□ -0.51
TRIM28-203ENST00000593582 RRASP10301 218 aa11.89□□□□□ -0.51
TRIM28-203ENST00000593582 CD40LGP29965 261 aa11.89□□□□□ -0.51
TRIM28-203ENST00000593582 KIAA0141Q14154 515 aaPredicted RBP11.89□□□□□ -0.51
TRIM28-203ENST00000593582 ZNF260Q3ZCT1 412 aa11.89□□□□□ -0.51
TRIM28-203ENST00000593582 AKIRIN2Q53H80 203 aa11.89□□□□□ -0.51
TRIM28-203ENST00000593582 ACTBL2Q562R1 376 aa11.89□□□□□ -0.51
TRIM28-203ENST00000593582 C19orf54Q5BKX5 351 aa11.89□□□□□ -0.51
TRIM28-203ENST00000593582 PYHIN1Q6K0P9 492 aa11.89□□□□□ -0.51
TRIM28-203ENST00000593582 ADTRPQ96IZ2 230 aa11.89□□□□□ -0.51
TRIM28-203ENST00000593582 GNB4Q9HAV0 340 aa11.89□□□□□ -0.51
TRIM28-203ENST00000593582 NUBP2Q9Y5Y2 271 aa11.89□□□□□ -0.51
TRIM28-203ENST00000593582 A0A087WXM4 84 aa11.88□□□□□ -0.51
TRIM28-203ENST00000593582 SHOXO15266 292 aa11.88□□□□□ -0.51
TRIM28-203ENST00000593582 SOX15O60248 233 aa11.88□□□□□ -0.51
TRIM28-203ENST00000593582 TMEM127O75204 238 aa11.88□□□□□ -0.51
TRIM28-203ENST00000593582 EGR2P11161 476 aaPredicted RBP11.88□□□□□ -0.51
TRIM28-203ENST00000593582 RUNX1Q01196 453 aa11.88□□□□□ -0.51
TRIM28-203ENST00000593582 FHL3Q13643 280 aa11.88□□□□□ -0.51
TRIM28-203ENST00000593582 CNIH2Q6PI25 160 aa11.88□□□□□ -0.51
TRIM28-203ENST00000593582 UNQ5815/PRO19632Q6UWF5 114 aa11.88□□□□□ -0.51
TRIM28-203ENST00000593582 LFNGQ8NES3 379 aa11.88□□□□□ -0.51
TRIM28-203ENST00000593582 TSPAN14Q8NG11 270 aa11.88□□□□□ -0.51
TRIM28-203ENST00000593582 OR1N2Q8NGR9 330 aa11.88□□□□□ -0.51
TRIM28-203ENST00000593582 OR5H6Q8NGV6 325 aa11.88□□□□□ -0.51
TRIM28-203ENST00000593582 ARPC1AQ92747 370 aa11.88□□□□□ -0.51
TRIM28-203ENST00000593582 C5orf30Q96GV9 206 aa11.88□□□□□ -0.51
TRIM28-203ENST00000593582 HARBI1Q96MB7 349 aa11.88□□□□□ -0.51
TRIM28-203ENST00000593582 OR5B12Q96R08 314 aa11.88□□□□□ -0.51
TRIM28-203ENST00000593582 FAM103A1Q9BTL3 118 aaKnown RBP11.88□□□□□ -0.51
TRIM28-203ENST00000593582 A0A0A6YYH2 397 aa11.87□□□□□ -0.51
TRIM28-203ENST00000593582 A6NJ64 397 aa11.87□□□□□ -0.51
TRIM28-203ENST00000593582 I3L521 148 aa11.87□□□□□ -0.51
TRIM28-203ENST00000593582 K7EIL1 84 aa11.87□□□□□ -0.51
TRIM28-203ENST00000593582 CNIH1O95406 144 aa11.87□□□□□ -0.51
TRIM28-203ENST00000593582 OR8U8P0C7N1 319 aa11.87□□□□□ -0.51
TRIM28-203ENST00000593582 NFYAP23511 347 aaPredicted RBP11.87□□□□□ -0.51
TRIM28-203ENST00000593582 LUMP51884 338 aaPredicted RBP11.87□□□□□ -0.51
TRIM28-203ENST00000593582 GNB1P62873 340 aa11.87□□□□□ -0.51
TRIM28-203ENST00000593582 ZNF616Q08AN1 781 aa11.87□□□□□ -0.51
TRIM28-203ENST00000593582 FXYD3Q14802 87 aa11.87□□□□□ -0.51
TRIM28-203ENST00000593582 CROCCP3Q8IVE0 287 aa11.87□□□□□ -0.51
TRIM28-203ENST00000593582 BVESQ8NE79 360 aa11.87□□□□□ -0.51
TRIM28-203ENST00000593582 GRPEL2Q8TAA5 225 aa11.87□□□□□ -0.51
TRIM28-203ENST00000593582 CASTOR1Q8WTX7 329 aa11.87□□□□□ -0.51
TRIM28-203ENST00000593582 SLC25A38Q96DW6 304 aa11.87□□□□□ -0.51
TRIM28-203ENST00000593582 TPSG1Q9NRR2 321 aa11.87□□□□□ -0.51
TRIM28-203ENST00000593582 ANXA10Q9UJ72 324 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms