RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CLCC1Q96S66 551 aa7.96□□□□□ -1.14
BRCA1-227ENST00000591849 DCUN1D5Q9BTE7 237 aa7.96□□□□□ -1.14
BRCA1-227ENST00000591849 NAA50Q9GZZ1 169 aaKnown RBP7.96□□□□□ -1.14
BRCA1-227ENST00000591849 NECAP2Q9NVZ3 263 aa7.96□□□□□ -1.14
BRCA1-227ENST00000591849 SDHAF2Q9NX18 166 aa7.96□□□□□ -1.14
BRCA1-227ENST00000591849 GAB2Q9UQC2 676 aa7.96□□□□□ -1.14
BRCA1-227ENST00000591849 OR2W1Q9Y3N9 320 aa7.96□□□□□ -1.14
BRCA1-227ENST00000591849 MEIS3P1A6NDR6 274 aa7.95□□□□□ -1.14
BRCA1-227ENST00000591849 SHOXO15266 292 aa7.95□□□□□ -1.14
BRCA1-227ENST00000591849 GABARAPO95166 117 aa7.95□□□□□ -1.14
BRCA1-227ENST00000591849 RRASP10301 218 aa7.95□□□□□ -1.14
BRCA1-227ENST00000591849 PTHLHP12272 177 aa7.95□□□□□ -1.14
BRCA1-227ENST00000591849 ZNF182P17025 639 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-227ENST00000591849 FCGR2CP31995 323 aa7.95□□□□□ -1.14
BRCA1-227ENST00000591849 RPL5P46777 297 aaKnown RBP7.95□□□□□ -1.14
BRCA1-227ENST00000591849 ALDH3B2P48448 385 aa7.95□□□□□ -1.14
BRCA1-227ENST00000591849 TAS2R20P59543 309 aa7.95□□□□□ -1.14
BRCA1-227ENST00000591849 TMEM65Q6PI78 240 aa7.95□□□□□ -1.14
BRCA1-227ENST00000591849 C10orf99Q6UWK7 81 aa7.95□□□□□ -1.14
BRCA1-227ENST00000591849 BVESQ8NE79 360 aa7.95□□□□□ -1.14
BRCA1-227ENST00000591849 CMTM3Q96MX0 182 aa7.95□□□□□ -1.14
BRCA1-227ENST00000591849 HSPB9Q9BQS6 159 aa7.95□□□□□ -1.14
BRCA1-227ENST00000591849 OR51J1Q9H342 316 aa7.95□□□□□ -1.14
BRCA1-227ENST00000591849 METTL1Q9UBP6 276 aaKnown RBP7.95□□□□□ -1.14
BRCA1-227ENST00000591849 PRELID3BQ9Y3B1 194 aa7.95□□□□□ -1.14
BRCA1-227ENST00000591849 WSB1Q9Y6I7 421 aa7.95□□□□□ -1.14
BRCA1-227ENST00000591849 NOTCH1P46531 2555 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 HPGDSO60760 199 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 PROP1O75360 226 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 NDUFA3O95167 84 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 CNIH1O95406 144 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 HLA-DRB1P01911 266 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 APOA1P02647 267 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 EIF4EP06730 217 aaKnown RBP7.94□□□□□ -1.14
BRCA1-227ENST00000591849 LGALS7P47929 136 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 LINC00205P59089 165 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 HERV-K104P61576 105 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 TMEM267Q0VDI3 215 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-227ENST00000591849 CDK10Q15131 360 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 PSG5Q15238 335 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 CTF1Q16619 201 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 TCTEX1D4Q5JR98 221 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 ZNF660Q6AZW8 331 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-227ENST00000591849 SNX29P2Q8IUI4 249 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 ZNF645Q8N7E2 425 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 OR5H2Q8NGV7 314 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 WIPF2Q8TF74 440 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-227ENST00000591849 SECTM1Q8WVN6 248 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 ZFP57Q9NU63 452 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 SCOCQ9UIL1 159 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 A3GALT2U3KPV4 340 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 TRRAPQ9Y4A5 3859 aa7.94□□□□□ -1.14
BRCA1-227ENST00000591849 IGHV7-81A0A0B4J1V7 117 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 TRAV41A0A0B4J266 112 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 CCDC160A6NGH7 325 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 ATP6V0E1O15342 81 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 RGS5O15539 181 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 SLC25A17O43808 307 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 SPDEFO95238 335 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 HLA-DQB1P01920 261 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 IGKV1-16P04430 117 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 ELANEP08246 267 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 CD33P20138 364 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 AADACP22760 399 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 CD40LGP29965 261 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 TAS2R46P59540 309 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 FXYD4P59646 89 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 RPL23AP62750 156 aaKnown RBP7.93□□□□□ -1.14
BRCA1-227ENST00000591849 GNB1P62873 340 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 CX3CL1P78423 397 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 FOXE3Q13461 319 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 ECSCRQ19T08 205 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 VMA21Q3ZAQ7 101 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 OR5AP2Q8NGF4 316 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 TCTEX1D2Q8WW35 142 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 HARBI1Q96MB7 349 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 SLC5A7Q9GZV3 580 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 EHFQ9NZC4 300 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 ADAM30Q9UKF2 790 aa7.93□□□□□ -1.14
BRCA1-227ENST00000591849 RBMX2Q9Y388 322 aaKnown RBP7.93□□□□□ -1.14
BRCA1-227ENST00000591849 TET2Q6N021 2002 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-227ENST00000591849 FCN1O00602 326 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 FCGR3BO75015 233 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 CRYZL1O95825 349 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 PMP2P02689 132 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 IGF1P05019 195 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 ELK1P19419 428 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 DUTP33316 252 aaKnown RBP7.92□□□□□ -1.14
BRCA1-227ENST00000591849 TMBIM6P55061 237 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 TSPAN5P62079 268 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 FXYD3Q14802 87 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 OR2B11Q5JQS5 317 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 UNQ5815/PRO19632Q6UWF5 114 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 KCTD9Q7L273 389 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 PPP1R27Q86WC6 154 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 ZNF695Q8IW36 515 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 KLHL30-AS1Q8NEE0 82 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 GRPEL2Q8TAA5 225 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 RAB2BQ8WUD1 216 aa7.92□□□□□ -1.14
BRCA1-227ENST00000591849 C15orf40Q8WUR7 153 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms