RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 C16orf87Q6PH81 154 aa10.95□□□□□ -0.66
VMP1-210ENST00000589823 GLDNQ6ZMI3 551 aaPredicted RBP10.95□□□□□ -0.66
VMP1-210ENST00000589823 KCTD9Q7L273 389 aa10.95□□□□□ -0.66
VMP1-210ENST00000589823 THNSL2Q86YJ6 484 aa10.95□□□□□ -0.66
VMP1-210ENST00000589823 BVESQ8NE79 360 aa10.95□□□□□ -0.66
VMP1-210ENST00000589823 TCTEX1D2Q8WW35 142 aa10.95□□□□□ -0.66
VMP1-210ENST00000589823 ZNF486Q96H40 463 aaPredicted RBP10.95□□□□□ -0.66
VMP1-210ENST00000589823 SLC35D1Q9NTN3 355 aa10.95□□□□□ -0.66
VMP1-210ENST00000589823 C14orf166Q9Y224 244 aaKnown RBP10.95□□□□□ -0.66
VMP1-210ENST00000589823 PRELID3BQ9Y3B1 194 aa10.95□□□□□ -0.66
VMP1-210ENST00000589823 MXRA5Q9NR99 2828 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 DNAJC9-AS1A6NH13 148 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 FAM90A9PA6NNJ1 464 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 RNF212BA8MTL3 300 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 H0YJW9 148 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 H7C2Y5 167 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 PLA2G10O15496 165 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 VENTXO95231 258 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 IGKV1D-33P01593 117 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 IGKV1-33P01594 117 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 RRASP10301 218 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 CATR1Q13166 79 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 SLC9A3R2Q15599 337 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 LY6EQ16553 131 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 PHLDA2Q53GA4 152 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 MZT2BQ6NZ67 158 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 ZNF383Q8NA42 475 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 OR5AN1Q8NGI8 311 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 OR13C8Q8NGS7 320 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 OR2T10Q8NGZ9 312 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 PIFOQ8TCI5 191 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 DUX5Q96PT3 197 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 SLC25A21Q9BQT8 299 aaPredicted RBP10.94□□□□□ -0.66
VMP1-210ENST00000589823 TCF19Q9Y242 345 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 WASHC3Q9Y3C0 194 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 ZFHX3Q15911 3703 aa10.94□□□□□ -0.66
VMP1-210ENST00000589823 LINC00473A8K010 186 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 PGLYRP1O75594 196 aaPredicted RBP10.93□□□□□ -0.66
VMP1-210ENST00000589823 MOSP00540 346 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 CTSDP07339 412 aaPredicted RBP10.93□□□□□ -0.66
VMP1-210ENST00000589823 TMEM11P17152 192 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 LINC00205P59089 165 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 DEFA1P59665 94 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 DEFA3P59666 94 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 ASAH1Q13510 395 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 EIF4EBP1Q13541 118 aaPredicted RBP10.93□□□□□ -0.66
VMP1-210ENST00000589823 RBMS2Q15434 407 aaKnown RBP10.93□□□□□ -0.66
VMP1-210ENST00000589823 RTL8BQ17RB0 113 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 LIAT1Q6ZQX7 453 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 PDPNQ86YL7 162 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 ZDHHC22Q8N966 263 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 CCDC71LQ8N9Z2 235 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 POC5Q8NA72 575 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 OR51H1Q8NH63 302 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 MRGPRFQ96AM1 343 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 ESM1Q9NQ30 184 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 COPZ2Q9P299 210 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 VPREB3Q9UKI3 123 aa10.93□□□□□ -0.66
VMP1-210ENST00000589823 A6NDX4 124 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 CLDN34H7C241 214 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 RLN1P04808 185 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 PI3P19957 117 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 KIR2DS2P43631 304 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 CCR6P51684 374 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 PIGPP57054 158 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 RND3P61587 244 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 RPL30P62888 115 aaKnown RBP10.92□□□□□ -0.66
VMP1-210ENST00000589823 EBI3Q14213 229 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 HNF4GQ14541 408 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 C16orf82Q7Z2V1 217 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 TBC1D26Q86UD7 250 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 EAF1Q96JC9 268 aaPredicted RBP10.92□□□□□ -0.66
VMP1-210ENST00000589823 GPHA2Q96T91 129 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 CHIAQ9BZP6 476 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 RAB18Q9NP72 206 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 SLC2A9Q9NRM0 540 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 TBC1D24Q9ULP9 559 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 GPR132Q9UNW8 380 aa10.92□□□□□ -0.66
VMP1-210ENST00000589823 TRIM77I1YAP6 450 aa10.91□□□□□ -0.66
VMP1-210ENST00000589823 FCGR3BO75015 233 aa10.91□□□□□ -0.66
VMP1-210ENST00000589823 OR2F2O95006 317 aa10.91□□□□□ -0.66
VMP1-210ENST00000589823 UBA52P62987 128 aaKnown RBP10.91□□□□□ -0.66
VMP1-210ENST00000589823 IFITM3Q01628 133 aa10.91□□□□□ -0.66
VMP1-210ENST00000589823 OR2B11Q5JQS5 317 aa10.91□□□□□ -0.66
VMP1-210ENST00000589823 DHRS7BQ6IAN0 325 aaPredicted RBP10.91□□□□□ -0.66
VMP1-210ENST00000589823 TMEM219Q86XT9 240 aa10.91□□□□□ -0.66
VMP1-210ENST00000589823 OR4C13Q8NGP0 309 aa10.91□□□□□ -0.66
VMP1-210ENST00000589823 DDB2Q92466 427 aa10.91□□□□□ -0.66
VMP1-210ENST00000589823 FLYWCH2Q96CP2 140 aaKnown RBP10.91□□□□□ -0.66
VMP1-210ENST00000589823 RBM14Q96PK6 669 aaKnown RBP10.91□□□□□ -0.66
VMP1-210ENST00000589823 LIN7CQ9NUP9 197 aaKnown RBP10.91□□□□□ -0.66
VMP1-210ENST00000589823 VSIG4Q9Y279 399 aa10.91□□□□□ -0.66
VMP1-210ENST00000589823 TEX13DA0A0J9YY54 714 aaPredicted RBP10.9□□□□□ -0.66
VMP1-210ENST00000589823 FAM240BA0A1B0GVZ2 78 aa10.9□□□□□ -0.66
VMP1-210ENST00000589823 MPPED1O15442 326 aa10.9□□□□□ -0.66
VMP1-210ENST00000589823 GPR137BO60478 399 aa10.9□□□□□ -0.66
VMP1-210ENST00000589823 NDUFB6O95139 128 aa10.9□□□□□ -0.66
VMP1-210ENST00000589823 IGKV1-16P04430 117 aa10.9□□□□□ -0.66
VMP1-210ENST00000589823 RNASE1P07998 156 aaKnown RBP10.9□□□□□ -0.66
VMP1-210ENST00000589823 F2RP25116 425 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms