RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 IFT46Q9NQC8 304 aa18.61■□□□□ 0.57
LSM7-205ENST00000589532 RABL2AQ9UBK7 228 aaPredicted RBP18.61■□□□□ 0.57
LSM7-205ENST00000589532 ZNF230Q9UIE0 474 aaPredicted RBP18.61■□□□□ 0.57
LSM7-205ENST00000589532 RABL2BQ9UNT1 228 aa18.61■□□□□ 0.57
LSM7-205ENST00000589532 MRPS7Q9Y2R9 242 aaKnown RBP18.61■□□□□ 0.57
LSM7-205ENST00000589532 GNMTQ14749 295 aa18.6■□□□□ 0.57
LSM7-205ENST00000589532 DEFB136Q30KP8 78 aa18.6■□□□□ 0.57
LSM7-205ENST00000589532 ELF5Q9UKW6 265 aaPredicted RBP18.6■□□□□ 0.57
LSM7-205ENST00000589532 CCL24O00175 119 aa18.59■□□□□ 0.57
LSM7-205ENST00000589532 IGHG4P01861 327 aa18.59■□□□□ 0.57
LSM7-205ENST00000589532 IGF1P05019 195 aa18.59■□□□□ 0.57
LSM7-205ENST00000589532 ELANEP08246 267 aa18.59■□□□□ 0.57
LSM7-205ENST00000589532 GSTT2P0CG29 244 aa18.59■□□□□ 0.57
LSM7-205ENST00000589532 GSTT2BP0CG30 244 aa18.59■□□□□ 0.57
LSM7-205ENST00000589532 CDX1P47902 265 aaPredicted RBP18.59■□□□□ 0.57
LSM7-205ENST00000589532 F2RL1P55085 397 aa18.59■□□□□ 0.57
LSM7-205ENST00000589532 ARPC4P59998 168 aa18.59■□□□□ 0.57
LSM7-205ENST00000589532 LSAMPQ13449 338 aa18.59■□□□□ 0.57
LSM7-205ENST00000589532 FHL3Q13643 280 aa18.59■□□□□ 0.57
LSM7-205ENST00000589532 CNIH2Q6PI25 160 aa18.59■□□□□ 0.57
LSM7-205ENST00000589532 MCFD2Q8NI22 146 aa18.59■□□□□ 0.57
LSM7-205ENST00000589532 MYOZ3Q8TDC0 251 aa18.59■□□□□ 0.57
LSM7-205ENST00000589532 C6orf62Q9GZU0 229 aaPredicted RBP18.59■□□□□ 0.57
LSM7-205ENST00000589532 SCPEP1Q9HB40 452 aa18.59■□□□□ 0.57
LSM7-205ENST00000589532 PIPOXQ9P0Z9 390 aa18.59■□□□□ 0.57
LSM7-205ENST00000589532 EXTL2Q9UBQ6 330 aa18.59■□□□□ 0.57
LSM7-205ENST00000589532 BET1O15155 118 aa18.58■□□□□ 0.56
LSM7-205ENST00000589532 SSX5O60225 188 aa18.58■□□□□ 0.56
LSM7-205ENST00000589532 HOGA1Q86XE5 327 aa18.58■□□□□ 0.56
LSM7-205ENST00000589532 BEST4Q8NFU0 473 aa18.58■□□□□ 0.56
LSM7-205ENST00000589532 OR8U1Q8NH10 309 aa18.58■□□□□ 0.56
LSM7-205ENST00000589532 MAFIPQ8WZ33 124 aa18.58■□□□□ 0.56
LSM7-205ENST00000589532 DGCR14Q96DF8 476 aaKnown RBP18.58■□□□□ 0.56
LSM7-205ENST00000589532 GON7Q9BXV9 100 aa18.58■□□□□ 0.56
LSM7-205ENST00000589532 ANXA10Q9UJ72 324 aa18.58■□□□□ 0.56
LSM7-205ENST00000589532 TRBV6-7A0A0A0MS04 114 aa18.57■□□□□ 0.56
LSM7-205ENST00000589532 LANCL1O43813 399 aa18.57■□□□□ 0.56
LSM7-205ENST00000589532 PSMB8P28062 276 aa18.57■□□□□ 0.56
LSM7-205ENST00000589532 LUMP51884 338 aaPredicted RBP18.57■□□□□ 0.56
LSM7-205ENST00000589532 CD69Q07108 199 aa18.57■□□□□ 0.56
LSM7-205ENST00000589532 CXorf66Q5JRM2 361 aaPredicted RBP18.57■□□□□ 0.56
LSM7-205ENST00000589532 ODF3L1Q8IXM7 274 aa18.57■□□□□ 0.56
LSM7-205ENST00000589532 TOLLIPQ9H0E2 274 aa18.57■□□□□ 0.56
LSM7-205ENST00000589532 RDH8Q9NYR8 311 aa18.57■□□□□ 0.56
LSM7-205ENST00000589532 OR1A1Q9P1Q5 309 aa18.57■□□□□ 0.56
LSM7-205ENST00000589532 DNAH7Q8WXX0 4024 aa18.57■□□□□ 0.56
LSM7-205ENST00000589532 SULT1C2O00338 296 aa18.56■□□□□ 0.56
LSM7-205ENST00000589532 RAB29O14966 203 aa18.56■□□□□ 0.56
LSM7-205ENST00000589532 DGCR2P98153 550 aa18.56■□□□□ 0.56
LSM7-205ENST00000589532 FAM71F2Q6NXP2 309 aa18.56■□□□□ 0.56
LSM7-205ENST00000589532 C5orf24Q7Z6I8 188 aa18.56■□□□□ 0.56
LSM7-205ENST00000589532 RASL11BQ9BPW5 248 aa18.56■□□□□ 0.56
LSM7-205ENST00000589532 DCUN1D5Q9BTE7 237 aa18.56■□□□□ 0.56
LSM7-205ENST00000589532 SLIRPQ9GZT3 109 aaKnown RBP18.56■□□□□ 0.56
LSM7-205ENST00000589532 ZNF221Q9UK13 617 aa18.56■□□□□ 0.56
LSM7-205ENST00000589532 RBM7Q9Y580 266 aaKnown RBP18.56■□□□□ 0.56
LSM7-205ENST00000589532 A3GALT2U3KPV4 340 aa18.56■□□□□ 0.56
LSM7-205ENST00000589532 IGSF11Q5DX21 431 aa18.55■□□□□ 0.56
LSM7-205ENST00000589532 SNX29P2Q8IUI4 249 aa18.55■□□□□ 0.56
LSM7-205ENST00000589532 C4orf3Q8WVX3 66 aa18.55■□□□□ 0.56
LSM7-205ENST00000589532 IGKV1-6A0A0C4DH72 117 aa18.54■□□□□ 0.56
LSM7-205ENST00000589532 CTDSP2O14595 271 aa18.54■□□□□ 0.56
LSM7-205ENST00000589532 HLA-DQB1P01920 261 aa18.54■□□□□ 0.56
LSM7-205ENST00000589532 S100A5P33763 92 aa18.54■□□□□ 0.56
LSM7-205ENST00000589532 MRPS10P82664 201 aaKnown RBP18.54■□□□□ 0.56
LSM7-205ENST00000589532 DCTN2Q13561 401 aaKnown RBP18.54■□□□□ 0.56
LSM7-205ENST00000589532 DIRAS2Q96HU8 199 aa18.54■□□□□ 0.56
LSM7-205ENST00000589532 C11orf54Q9H0W9 315 aaPredicted RBP18.54■□□□□ 0.56
LSM7-205ENST00000589532 LSM4Q9Y4Z0 139 aaKnown RBP18.54■□□□□ 0.56
LSM7-205ENST00000589532 DYNC2H1Q8NCM8 4307 aaKnown RBP18.53■□□□□ 0.56
LSM7-205ENST00000589532 ST8SIA5O15466 376 aa18.53■□□□□ 0.56
LSM7-205ENST00000589532 VDAC1P21796 283 aa18.53■□□□□ 0.56
LSM7-205ENST00000589532 PPIFP30405 207 aaKnown RBP18.53■□□□□ 0.56
LSM7-205ENST00000589532 TAS2R46P59540 309 aa18.53■□□□□ 0.56
LSM7-205ENST00000589532 LAX1Q8IWV1 398 aa18.53■□□□□ 0.56
LSM7-205ENST00000589532 OR5M8Q8NGP6 311 aa18.53■□□□□ 0.56
LSM7-205ENST00000589532 NXF2Q9GZY0 626 aaKnown RBP18.53■□□□□ 0.56
LSM7-205ENST00000589532 IFI27L2Q9H2X8 130 aa18.53■□□□□ 0.56
LSM7-205ENST00000589532 ZMAT5Q9UDW3 170 aaKnown RBP18.53■□□□□ 0.56
LSM7-205ENST00000589532 ZNF107Q9UII5 783 aaPredicted RBP18.53■□□□□ 0.56
LSM7-205ENST00000589532 DPPA5A6NC42 116 aa18.52■□□□□ 0.56
LSM7-205ENST00000589532 RAMP3O60896 148 aa18.52■□□□□ 0.56
LSM7-205ENST00000589532 PTHLHP12272 177 aa18.52■□□□□ 0.56
LSM7-205ENST00000589532 OR3A3P47888 321 aa18.52■□□□□ 0.56
LSM7-205ENST00000589532 RAB25P57735 213 aa18.52■□□□□ 0.56
LSM7-205ENST00000589532 KIAA0141Q14154 515 aaPredicted RBP18.52■□□□□ 0.56
LSM7-205ENST00000589532 MMDQ15546 238 aa18.52■□□□□ 0.56
LSM7-205ENST00000589532 ZNF833PQ6ZTB9 187 aa18.52■□□□□ 0.56
LSM7-205ENST00000589532 H1FOOQ8IZA3 346 aaPredicted RBP18.52■□□□□ 0.56
LSM7-205ENST00000589532 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.52■□□□□ 0.56
LSM7-205ENST00000589532 OR5AP2Q8NGF4 316 aa18.52■□□□□ 0.56
LSM7-205ENST00000589532 GPX8Q8TED1 209 aa18.52■□□□□ 0.56
LSM7-205ENST00000589532 RITA1Q96K30 269 aa18.52■□□□□ 0.56
LSM7-205ENST00000589532 NABP2Q9BQ15 211 aa18.52■□□□□ 0.56
LSM7-205ENST00000589532 MRPL20Q9BYC9 149 aaKnown RBP18.52■□□□□ 0.56
LSM7-205ENST00000589532 MIXL1Q9H2W2 232 aa18.52■□□□□ 0.56
LSM7-205ENST00000589532 IGKV1D-8A0A087WSZ0 117 aa18.51■□□□□ 0.55
LSM7-205ENST00000589532 SAA2-SAA4A0A096LPE2 208 aa18.51■□□□□ 0.55
LSM7-205ENST00000589532 SLC22A5O76082 557 aa18.51■□□□□ 0.55
LSM7-205ENST00000589532 HLA-DRB1P01911 266 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms