RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	GATA4	P43694	442 aa		12.9	□□□□□ -0.35
DDX39A-209	ENST00000589318	RND2	P52198	227 aa		12.9	□□□□□ -0.35
DDX39A-209	ENST00000589318	PNRC1	Q12796	327 aa	Predicted RBP	12.9	□□□□□ -0.35
DDX39A-209	ENST00000589318	SGPP2	Q8IWX5	399 aa		12.9	□□□□□ -0.35
DDX39A-209	ENST00000589318	LINC01560	Q8TB33	94 aa		12.9	□□□□□ -0.35
DDX39A-209	ENST00000589318	LRRC29	Q8WV35	223 aa		12.9	□□□□□ -0.35
DDX39A-209	ENST00000589318	ITLN1	Q8WWA0	313 aa		12.9	□□□□□ -0.35
DDX39A-209	ENST00000589318	FAM210B	Q96KR6	192 aa		12.9	□□□□□ -0.35
DDX39A-209	ENST00000589318	SUCNR1	Q9BXA5	334 aa		12.9	□□□□□ -0.35
DDX39A-209	ENST00000589318	RIMS4	Q9H426	269 aa	Predicted RBP	12.9	□□□□□ -0.35
DDX39A-209	ENST00000589318	ATP23	Q9Y6H3	246 aa		12.9	□□□□□ -0.35
DDX39A-209	ENST00000589318	IGSF10	Q6WRI0	2623 aa		12.89	□□□□□ -0.35
DDX39A-209	ENST00000589318	ANKHD1	Q8IWZ3	2542 aa	Known RBP	12.89	□□□□□ -0.35
DDX39A-209	ENST00000589318	SRRM5	B3KS81	715 aa		12.89	□□□□□ -0.35
DDX39A-209	ENST00000589318		K7N7A8	449 aa		12.89	□□□□□ -0.35
DDX39A-209	ENST00000589318	HSD17B6	O14756	317 aa		12.89	□□□□□ -0.35
DDX39A-209	ENST00000589318	PSPN	O60542	156 aa		12.89	□□□□□ -0.35
DDX39A-209	ENST00000589318	KNG1	P01042	644 aa		12.89	□□□□□ -0.35
DDX39A-209	ENST00000589318	GZMB	P10144	247 aa		12.89	□□□□□ -0.35
DDX39A-209	ENST00000589318	PI3	P19957	117 aa		12.89	□□□□□ -0.35
DDX39A-209	ENST00000589318	TFF3	Q07654	80 aa		12.89	□□□□□ -0.35
DDX39A-209	ENST00000589318	HERPUD1	Q15011	391 aa		12.89	□□□□□ -0.35
DDX39A-209	ENST00000589318	GCSAM	Q8N6F7	178 aa		12.89	□□□□□ -0.35
DDX39A-209	ENST00000589318	PLPPR2	Q96GM1	343 aa		12.89	□□□□□ -0.35
DDX39A-209	ENST00000589318	HIPK2	Q9H2X6	1198 aa		12.89	□□□□□ -0.35
DDX39A-209	ENST00000589318	OR14J1	Q9UGF5	321 aa		12.89	□□□□□ -0.35
DDX39A-209	ENST00000589318	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	SIAH2	O43255	324 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	TFF1	P04155	84 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	SCT	P09683	121 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	MDH2	P40926	338 aa	Known RBP	12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	COA6	Q5JTJ3	125 aa	Known RBP	12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	ZNF497	Q6ZNH5	498 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	ZNF429	Q86V71	674 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	MOGAT3	Q86VF5	341 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	ZNF664	Q8N3J9	261 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	PRR7	Q8TB68	274 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	IL19	Q9UHD0	177 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	ERRFI1	Q9UJM3	462 aa	Predicted RBP	12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	CFAP46	Q8IYW2	2715 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	TRBV24-1	A0A075B6N3	115 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	IGKV1-6	A0A0C4DH72	117 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	LHB	P01229	141 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	SRP19	P09132	144 aa	Known RBP	12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	PCP4	P48539	62 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	ERVFRD-1	P60508	538 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	HAGH	Q16775	308 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	SMIM21	Q3B7S5	101 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	GFI1B	Q5VTD9	330 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	CA5BP1	Q8WTZ4	195 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	NEUROG1	Q92886	237 aa		12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	RBMXL1	Q96E39	390 aa	Known RBP	12.88	□□□□□ -0.35
DDX39A-209	ENST00000589318	TRDC	B7Z8K6	153 aa		12.87	□□□□□ -0.35
DDX39A-209	ENST00000589318		E7EQL1	145 aa		12.87	□□□□□ -0.35
DDX39A-209	ENST00000589318	ADH4	P08319	380 aa		12.87	□□□□□ -0.35
DDX39A-209	ENST00000589318	UQCRFS1	P47985	274 aa		12.87	□□□□□ -0.35
DDX39A-209	ENST00000589318	ABHD5	Q8WTS1	349 aa		12.87	□□□□□ -0.35
DDX39A-209	ENST00000589318	FRZB	Q92765	325 aa		12.87	□□□□□ -0.35
DDX39A-209	ENST00000589318	VAX2	Q9UIW0	290 aa		12.87	□□□□□ -0.35
DDX39A-209	ENST00000589318	METRN	Q9UJH8	293 aa		12.87	□□□□□ -0.35
DDX39A-209	ENST00000589318	GOLT1B	Q9Y3E0	138 aa		12.87	□□□□□ -0.35
DDX39A-209	ENST00000589318	PKDREJ	Q9NTG1	2253 aa		12.87	□□□□□ -0.35
DDX39A-209	ENST00000589318	DSCAM	O60469	2012 aa		12.87	□□□□□ -0.35
DDX39A-209	ENST00000589318	DYSF	O75923	2080 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	TGIF2-C20orf24	A0A0A6YYL0	155 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	TK1	P04183	234 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	EPHA1	P21709	976 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	TNFAIP6	P98066	277 aa	Predicted RBP	12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	ZNF506	Q5JVG8	444 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	DPPA3	Q6W0C5	159 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	SMIM3	Q9BZL3	60 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	CTDSP1	Q9GZU7	261 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	GCM1	Q9NP62	436 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	KIR2DS1	A0A191URI9	304 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	ZNF727	A8MUV8	499 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	CLDN34	H7C241	214 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	IFNL4	K9M1U5	179 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	HBE1	P02100	147 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	OPN1MW	P04001	364 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	OPN1MW2	P0DN77	364 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	OPN1MW3	P0DN78	364 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	KIR2DS4	P43632	304 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	ZNF266	Q14584	549 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	KIR2DS1	Q14954	304 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	KIAA2026	Q5HYC2	2103 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	CD177	Q8N6Q3	437 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	MOB3A	Q96BX8	217 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	MBNL3	Q9NUK0	354 aa	Known RBP	12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	ARFGEF3	Q5TH69	2177 aa		12.86	□□□□□ -0.35
DDX39A-209	ENST00000589318	IGKV1D-17	A0A075B6S4	117 aa		12.85	□□□□□ -0.35
DDX39A-209	ENST00000589318	C17orf100	A8MU93	164 aa		12.85	□□□□□ -0.35
DDX39A-209	ENST00000589318	DLEU1	O43261	78 aa		12.85	□□□□□ -0.35
DDX39A-209	ENST00000589318	PLAU	P00749	431 aa		12.85	□□□□□ -0.35
DDX39A-209	ENST00000589318	CTSD	P07339	412 aa	Predicted RBP	12.85	□□□□□ -0.35
DDX39A-209	ENST00000589318	CD55	P08174	381 aa		12.85	□□□□□ -0.35
DDX39A-209	ENST00000589318	PSG2	P11465	335 aa		12.85	□□□□□ -0.35
DDX39A-209	ENST00000589318	AADAC	P22760	399 aa		12.85	□□□□□ -0.35
DDX39A-209	ENST00000589318	LOX	P28300	417 aa	Predicted RBP	12.85	□□□□□ -0.35
DDX39A-209	ENST00000589318	OR3A1	P47881	315 aa		12.85	□□□□□ -0.35
DDX39A-209	ENST00000589318	HLA-DRB3	P79483	266 aa		12.85	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms