RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 SMAGPQ0VAQ4 97 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 C4orf26Q17RF5 130 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 PLCZ1Q86YW0 608 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 FUNDC1Q8IVP5 155 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 CD302Q8IX05 232 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 CYGBQ8WWM9 190 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 PPCDCQ96CD2 204 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 TBX5Q99593 518 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 MGLLQ99685 303 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 C7orf50Q9BRJ6 194 aaKnown RBP1.45□□□□□ -2.18
SMAD4-207ENST00000589076 C11orf1Q9H5F2 150 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 TMEM106BQ9NUM4 274 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 PARVAQ9NVD7 372 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 EURLQ9NYK6 297 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 HHLA2Q9UM44 414 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 SNX12Q9UMY4 172 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 CCL26Q9Y258 94 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 RNF213Q63HN8 5207 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 ZDBF2Q9HCK1 2354 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 MXRA5Q9NR99 2828 aa1.45□□□□□ -2.18
SMAD4-207ENST00000589076 EP300Q09472 2414 aaPredicted RBP1.45□□□□□ -2.18
SMAD4-207ENST00000589076 EP400Q96L91 3159 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 COL5A3P25940 1745 aaPredicted RBP1.44□□□□□ -2.18
SMAD4-207ENST00000589076 A0A0J9YX75 114 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 FABP12A6NFH5 140 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 CETN3O15182 167 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 TRAPPC3O43617 180 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 HPGDSO60760 199 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 LY6HO94772 140 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 PSMG1O95456 288 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 ESDP10768 282 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 MIPP30301 263 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 CLDN12P56749 244 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 LINC00313P59037 77 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 UBE2G2P60604 165 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 FAM229BQ4G0N7 80 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 MESTQ5EB52 335 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 LCN8Q6JVE9 175 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 DNM1P34Q6PK57 102 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 RASL11AQ6T310 242 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 FAM9CQ8IZT9 166 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 FNDC9Q8TBE3 224 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 MBOAT7Q96N66 472 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 CDCA4Q9BXL8 241 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 MROQ9BYG7 248 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 UPF3BQ9BZI7 483 aaKnown RBP1.44□□□□□ -2.18
SMAD4-207ENST00000589076 HDHD2Q9H0R4 259 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 IMP3Q9NV31 184 aaKnown RBP1.44□□□□□ -2.18
SMAD4-207ENST00000589076 PSMD13Q9UNM6 376 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 A0A1W2PP64 1363 aa1.44□□□□□ -2.18
SMAD4-207ENST00000589076 SPTBN5Q9NRC6 3674 aaKnown RBP1.43□□□□□ -2.18
SMAD4-207ENST00000589076 TRAV8-1A0A0A6YYK1 113 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 IGHV3-73A0A0B4J1V6 119 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 GRIFINA4D1Z8 144 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 KNCNA6PVL3 124 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 LY6LH3BQJ8 138 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 UBFD1O14562 309 aaKnown RBP1.43□□□□□ -2.18
SMAD4-207ENST00000589076 ITGB1BP1O14713 200 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 ATP8B1O43520 1251 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 SOD1P00441 154 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 ATP5G1P05496 136 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 ZNF7P17097 686 aaPredicted RBP1.43□□□□□ -2.18
SMAD4-207ENST00000589076 NPPCP23582 126 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 CD40LGP29965 261 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 CD79BP40259 229 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 GABRA4P48169 554 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 TSPEAR-AS2P59090 65 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 TAS2R45P59539 299 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 TMEM267Q0VDI3 215 aaPredicted RBP1.43□□□□□ -2.18
SMAD4-207ENST00000589076 FOXF1Q12946 379 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 EBPQ15125 230 aaKnown RBP1.43□□□□□ -2.18
SMAD4-207ENST00000589076 DRAM2Q6UX65 266 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 FAM19A5Q7Z5A7 132 aaPredicted RBP1.43□□□□□ -2.18
SMAD4-207ENST00000589076 Q8NDZ9 215 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 OR10D3Q8NH80 312 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 SLC37A2Q8TED4 501 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 DNAJC30Q96LL9 226 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 DHRS9Q9BPW9 319 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 SLC22A4Q9H015 551 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 OR51B6Q9H340 312 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 TXNL4BQ9NX01 149 aaKnown RBP1.43□□□□□ -2.18
SMAD4-207ENST00000589076 GBF1Q92538 1859 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 SCN9AQ15858 1988 aa1.43□□□□□ -2.18
SMAD4-207ENST00000589076 KDM5BQ9UGL1 1544 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 CELSR1Q9NYQ6 3014 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 C1orf232A0A0U1RR37 186 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 TEX50A0A1B0GTY4 177 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 SLC17A3O00476 420 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 AZIN1O14977 448 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 ADAP1O75689 374 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 ZNF189O75820 626 aaPredicted RBP1.42□□□□□ -2.18
SMAD4-207ENST00000589076 CRHBPP24387 322 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 OR10J1P30954 320 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 CA7P43166 264 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 HERVK_113P63121 156 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 BTN3A2P78410 334 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 MGAT3Q09327 533 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 ATP5L2Q7Z4Y8 100 aa1.42□□□□□ -2.18
SMAD4-207ENST00000589076 RIBC1Q8N443 379 aaPredicted RBP1.42□□□□□ -2.18
SMAD4-207ENST00000589076 OR2D3Q8NGH3 330 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms