RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 TUBA4BQ9H853 241 aa10.67□□□□□ -0.7
VMP1-209ENST00000588915 OR1A1Q9P1Q5 309 aa10.67□□□□□ -0.7
VMP1-209ENST00000588915 PEF1Q9UBV8 284 aaKnown RBP10.67□□□□□ -0.7
VMP1-209ENST00000588915 SLC25A17O43808 307 aa10.66□□□□□ -0.7
VMP1-209ENST00000588915 CNIH1O95406 144 aa10.66□□□□□ -0.7
VMP1-209ENST00000588915 CRYGBP07316 175 aa10.66□□□□□ -0.7
VMP1-209ENST00000588915 RANBP1P43487 201 aa10.66□□□□□ -0.7
VMP1-209ENST00000588915 RBM48Q5RL73 367 aaKnown RBP10.66□□□□□ -0.7
VMP1-209ENST00000588915 HAPLN4Q86UW8 402 aa10.66□□□□□ -0.7
VMP1-209ENST00000588915 DRAXINQ8NBI3 349 aaPredicted RBP10.66□□□□□ -0.7
VMP1-209ENST00000588915 OR6M1Q8NGM8 313 aa10.66□□□□□ -0.7
VMP1-209ENST00000588915 GRPEL2Q8TAA5 225 aa10.66□□□□□ -0.7
VMP1-209ENST00000588915 LPAR5Q9H1C0 372 aa10.66□□□□□ -0.7
VMP1-209ENST00000588915 Q9N2K0 584 aa10.66□□□□□ -0.7
VMP1-209ENST00000588915 AK3Q9UIJ7 227 aa10.66□□□□□ -0.7
VMP1-209ENST00000588915 A0A0A6YYD4 124 aa10.65□□□□□ -0.7
VMP1-209ENST00000588915 ANKRD34BA5PLL1 514 aa10.65□□□□□ -0.7
VMP1-209ENST00000588915 AIREO43918 545 aa10.65□□□□□ -0.7
VMP1-209ENST00000588915 JTBO76095 146 aa10.65□□□□□ -0.7
VMP1-209ENST00000588915 CSN3P07498 182 aa10.65□□□□□ -0.7
VMP1-209ENST00000588915 SCTP09683 121 aa10.65□□□□□ -0.7
VMP1-209ENST00000588915 SERPINB10P48595 397 aa10.65□□□□□ -0.7
VMP1-209ENST00000588915 MECP2P51608 486 aaKnown RBP10.65□□□□□ -0.7
VMP1-209ENST00000588915 SYNJ2BPP57105 145 aa10.65□□□□□ -0.7
VMP1-209ENST00000588915 SSBP2P81877 361 aaPredicted RBP10.65□□□□□ -0.7
VMP1-209ENST00000588915 HSD17B12Q53GQ0 312 aa10.65□□□□□ -0.7
VMP1-209ENST00000588915 C8orf59Q8N0T1 100 aaPredicted RBP10.65□□□□□ -0.7
VMP1-209ENST00000588915 FBLIM1Q8WUP2 373 aa10.65□□□□□ -0.7
VMP1-209ENST00000588915 C12orf4Q9NQ89 552 aa10.65□□□□□ -0.7
VMP1-209ENST00000588915 SLC35D1Q9NTN3 355 aa10.65□□□□□ -0.7
VMP1-209ENST00000588915 FKBP14Q9NWM8 211 aa10.65□□□□□ -0.7
VMP1-209ENST00000588915 SHISA3A0PJX4 238 aa10.64□□□□□ -0.71
VMP1-209ENST00000588915 ERICH4A6NGS2 130 aa10.64□□□□□ -0.71
VMP1-209ENST00000588915 FOXI3A8MTJ6 420 aaPredicted RBP10.64□□□□□ -0.71
VMP1-209ENST00000588915 SOCS1O15524 211 aa10.64□□□□□ -0.71
VMP1-209ENST00000588915 OR2A4O95047 310 aa10.64□□□□□ -0.71
VMP1-209ENST00000588915 IGLV2-23P01705 113 aa10.64□□□□□ -0.71
VMP1-209ENST00000588915 UCHL1P09936 223 aa10.64□□□□□ -0.71
VMP1-209ENST00000588915 TMEM50BP56557 158 aa10.64□□□□□ -0.71
VMP1-209ENST00000588915 INSL4Q14641 139 aa10.64□□□□□ -0.71
VMP1-209ENST00000588915 LAIR2Q6ISS4 152 aa10.64□□□□□ -0.71
VMP1-209ENST00000588915 ADAMTSL5Q6ZMM2 481 aa10.64□□□□□ -0.71
VMP1-209ENST00000588915 LINC00322Q6ZN03 302 aaPredicted RBP10.64□□□□□ -0.71
VMP1-209ENST00000588915 AHSA2Q719I0 299 aa10.64□□□□□ -0.71
VMP1-209ENST00000588915 LAX1Q8IWV1 398 aa10.64□□□□□ -0.71
VMP1-209ENST00000588915 SNAPC3Q92966 411 aa10.64□□□□□ -0.71
VMP1-209ENST00000588915 TMED9Q9BVK6 235 aa10.64□□□□□ -0.71
VMP1-209ENST00000588915 MND1Q9BWT6 205 aa10.64□□□□□ -0.71
VMP1-209ENST00000588915 PEMTQ9UBM1 199 aa10.64□□□□□ -0.71
VMP1-209ENST00000588915 TRDCB7Z8K6 153 aa10.63□□□□□ -0.71
VMP1-209ENST00000588915 SLC17A2O00624 439 aa10.63□□□□□ -0.71
VMP1-209ENST00000588915 DIRAS3O95661 229 aa10.63□□□□□ -0.71
VMP1-209ENST00000588915 RRASP10301 218 aa10.63□□□□□ -0.71
VMP1-209ENST00000588915 SNRPBP14678 240 aaKnown RBP10.63□□□□□ -0.71
VMP1-209ENST00000588915 LINC00205P59089 165 aa10.63□□□□□ -0.71
VMP1-209ENST00000588915 CBX3Q13185 183 aa10.63□□□□□ -0.71
VMP1-209ENST00000588915 RPEL1Q2QD12 228 aa10.63□□□□□ -0.71
VMP1-209ENST00000588915 TMEM177Q53S58 311 aa10.63□□□□□ -0.71
VMP1-209ENST00000588915 CEACAM19Q7Z692 300 aa10.63□□□□□ -0.71
VMP1-209ENST00000588915 BPIFB6Q8NFQ5 453 aa10.63□□□□□ -0.71
VMP1-209ENST00000588915 OR4A4PQ8NGN8 299 aa10.63□□□□□ -0.71
VMP1-209ENST00000588915 CMSS1Q9BQ75 279 aaKnown RBP10.63□□□□□ -0.71
VMP1-209ENST00000588915 HDHD3Q9BSH5 251 aaPredicted RBP10.63□□□□□ -0.71
VMP1-209ENST00000588915 RDH8Q9NYR8 311 aa10.63□□□□□ -0.71
VMP1-209ENST00000588915 PLECQ15149 4684 aaKnown RBP10.63□□□□□ -0.71
VMP1-209ENST00000588915 A0A0B4J203 849 aa10.62□□□□□ -0.71
VMP1-209ENST00000588915 IGKV1-6A0A0C4DH72 117 aa10.62□□□□□ -0.71
VMP1-209ENST00000588915 M0R1X1 148 aa10.62□□□□□ -0.71
VMP1-209ENST00000588915 PJVKQ0ZLH3 352 aa10.62□□□□□ -0.71
VMP1-209ENST00000588915 DYRK1AQ13627 763 aa10.62□□□□□ -0.71
VMP1-209ENST00000588915 SPHARQ15513 63 aa10.62□□□□□ -0.71
VMP1-209ENST00000588915 FAM209BQ5JX69 171 aa10.62□□□□□ -0.71
VMP1-209ENST00000588915 TEX45Q8NA69 505 aa10.62□□□□□ -0.71
VMP1-209ENST00000588915 BVESQ8NE79 360 aa10.62□□□□□ -0.71
VMP1-209ENST00000588915 OR56B1Q8NGI3 324 aa10.62□□□□□ -0.71
VMP1-209ENST00000588915 CENPOQ9BU64 300 aa10.62□□□□□ -0.71
VMP1-209ENST00000588915 PECRQ9BY49 303 aa10.62□□□□□ -0.71
VMP1-209ENST00000588915 HIPK2Q9H2X6 1198 aa10.62□□□□□ -0.71
VMP1-209ENST00000588915 KCNK15Q9H427 330 aa10.62□□□□□ -0.71
VMP1-209ENST00000588915 CEPT1Q9Y6K0 416 aa10.62□□□□□ -0.71
VMP1-209ENST00000588915 SHOXO15266 292 aa10.61□□□□□ -0.71
VMP1-209ENST00000588915 CDK1P06493 297 aa10.61□□□□□ -0.71
VMP1-209ENST00000588915 GNAO1P09471 354 aa10.61□□□□□ -0.71
VMP1-209ENST00000588915 TPBGQ13641 420 aa10.61□□□□□ -0.71
VMP1-209ENST00000588915 RTL8BQ17RB0 113 aa10.61□□□□□ -0.71
VMP1-209ENST00000588915 ARHGAP5-AS1Q96IT6 56 aa10.61□□□□□ -0.71
VMP1-209ENST00000588915 HARBI1Q96MB7 349 aa10.61□□□□□ -0.71
VMP1-209ENST00000588915 PLGRKTQ9HBL7 147 aa10.61□□□□□ -0.71
VMP1-209ENST00000588915 SDHAF2Q9NX18 166 aa10.61□□□□□ -0.71
VMP1-209ENST00000588915 COA4Q9NYJ1 87 aa10.61□□□□□ -0.71
VMP1-209ENST00000588915 IZUMO1RA6ND01 250 aa10.6□□□□□ -0.71
VMP1-209ENST00000588915 MSGN1A6NI15 193 aa10.6□□□□□ -0.71
VMP1-209ENST00000588915 FAM223BA6NKX1 122 aa10.6□□□□□ -0.71
VMP1-209ENST00000588915 SRRM4A7MD48 611 aaKnown RBP10.6□□□□□ -0.71
VMP1-209ENST00000588915 TRBV12-3P01733 135 aa10.6□□□□□ -0.71
VMP1-209ENST00000588915 OR9G9P0C7N8 305 aa10.6□□□□□ -0.71
VMP1-209ENST00000588915 UBE2KP61086 200 aa10.6□□□□□ -0.71
VMP1-209ENST00000588915 MRPS15P82914 257 aaKnown RBP10.6□□□□□ -0.71
VMP1-209ENST00000588915 P2RY14Q15391 338 aa10.6□□□□□ -0.71
VMP1-209ENST00000588915 VMA21Q3ZAQ7 101 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms