RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 ANKRD55Q3KP44 614 aa16.28■□□□□ 0.2
CAPNS1-205ENST00000588780 ZNF57Q68EA5 555 aaPredicted RBP16.28■□□□□ 0.2
CAPNS1-205ENST00000588780 CENPNQ96H22 339 aaPredicted RBP16.28■□□□□ 0.2
CAPNS1-205ENST00000588780 FAM223BA6NKX1 122 aa16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 PPP5D1E7EU14 171 aa16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 M0R1X1 148 aa16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 ZBTB25P24278 435 aa16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 APOC4P55056 127 aa16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 CBX3Q13185 183 aa16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 TMPRSS11AQ6ZMR5 421 aa16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 WFDC3Q8IUB2 231 aa16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 FAM223AQ8IWN6 122 aa16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 TMEM61Q8N0U2 210 aa16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 SVOPQ8N4V2 548 aa16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 ADAD2Q8NCV1 583 aaKnown RBP16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 CACNG8Q8WXS5 425 aa16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 HARBI1Q96MB7 349 aa16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 AGMATQ9BSE5 352 aa16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 OR1A1Q9P1Q5 309 aa16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 ZNF230Q9UIE0 474 aaPredicted RBP16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 TP53TG1Q9Y2A0 90 aa16.27■□□□□ 0.2
CAPNS1-205ENST00000588780 ITGB1BP1O14713 200 aa16.26■□□□□ 0.19
CAPNS1-205ENST00000588780 HLA-AP01891 365 aaKnown RBP16.26■□□□□ 0.19
CAPNS1-205ENST00000588780 TNXAQ16473 311 aa16.26■□□□□ 0.19
CAPNS1-205ENST00000588780 Q499Y3 187 aa16.26■□□□□ 0.19
CAPNS1-205ENST00000588780 C6orf201Q7Z4U5 140 aa16.26■□□□□ 0.19
CAPNS1-205ENST00000588780 KCNG3Q8TAE7 436 aa16.26■□□□□ 0.19
CAPNS1-205ENST00000588780 SMIM19Q96E16 107 aa16.26■□□□□ 0.19
CAPNS1-205ENST00000588780 HECTD4Q9Y4D8 3996 aa16.26■□□□□ 0.19
CAPNS1-205ENST00000588780 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.25■□□□□ 0.19
CAPNS1-205ENST00000588780 SHOXO15266 292 aa16.25■□□□□ 0.19
CAPNS1-205ENST00000588780 OR2C1O95371 312 aa16.25■□□□□ 0.19
CAPNS1-205ENST00000588780 LIMS3P0CW19 117 aa16.25■□□□□ 0.19
CAPNS1-205ENST00000588780 LIMS4P0CW20 117 aa16.25■□□□□ 0.19
CAPNS1-205ENST00000588780 TM4SF20Q53R12 229 aa16.25■□□□□ 0.19
CAPNS1-205ENST00000588780 OR2G6Q5TZ20 316 aa16.25■□□□□ 0.19
CAPNS1-205ENST00000588780 Q6ZWC4 215 aa16.25■□□□□ 0.19
CAPNS1-205ENST00000588780 EXOSC1Q9Y3B2 195 aaKnown RBP16.25■□□□□ 0.19
CAPNS1-205ENST00000588780 RPL36Q9Y3U8 105 aaKnown RBP16.25■□□□□ 0.19
CAPNS1-205ENST00000588780 ZNF320A2RRD8 509 aa16.24■□□□□ 0.19
CAPNS1-205ENST00000588780 GGCTO75223 188 aaKnown RBP16.24■□□□□ 0.19
CAPNS1-205ENST00000588780 IGLV2-23P01705 113 aa16.24■□□□□ 0.19
CAPNS1-205ENST00000588780 CBLN1P23435 193 aa16.24■□□□□ 0.19
CAPNS1-205ENST00000588780 MOB1BQ7L9L4 216 aa16.24■□□□□ 0.19
CAPNS1-205ENST00000588780 ACOT12Q8WYK0 555 aa16.24■□□□□ 0.19
CAPNS1-205ENST00000588780 TRBV5-5A0A0J9YX44 114 aa16.23■□□□□ 0.19
CAPNS1-205ENST00000588780 PROP1O75360 226 aa16.23■□□□□ 0.19
CAPNS1-205ENST00000588780 ATF4P18848 351 aaPredicted RBP16.23■□□□□ 0.19
CAPNS1-205ENST00000588780 DYNC1I1O14576 645 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 EI24O14681 340 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 OGG1O15527 345 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 ALPLP05186 524 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 CRYGBP07316 175 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 MAP2K4P45985 399 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 ETV1P50549 477 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 PRR20EP86478 221 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 PRR20CP86479 221 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 PRR20DP86480 221 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 PRR20BP86481 221 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 PRR20AP86496 221 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 C15orf32Q32M92 178 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 YIF1BQ5BJH7 314 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 C1orf146Q5VVC0 180 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 CDH26Q8IXH8 852 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 STPG3Q8N7X2 389 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 SLC7A6OSQ96CW6 309 aaPredicted RBP16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 BABAM2Q9NXR7 383 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 FBXL17Q9UF56 701 aa16.22■□□□□ 0.19
CAPNS1-205ENST00000588780 LGALS9O00182 355 aa16.21■□□□□ 0.19
CAPNS1-205ENST00000588780 OR2J3O76001 311 aa16.21■□□□□ 0.19
CAPNS1-205ENST00000588780 IFNA4P05014 189 aa16.21■□□□□ 0.19
CAPNS1-205ENST00000588780 GABRB1P18505 474 aa16.21■□□□□ 0.19
CAPNS1-205ENST00000588780 FAM209BQ5JX69 171 aa16.21■□□□□ 0.19
CAPNS1-205ENST00000588780 OR10K2Q6IF99 312 aa16.21■□□□□ 0.19
CAPNS1-205ENST00000588780 RBPMS2Q6ZRY4 209 aaKnown RBP16.21■□□□□ 0.19
CAPNS1-205ENST00000588780 ZFP41Q8N8Y5 198 aa16.21■□□□□ 0.19
CAPNS1-205ENST00000588780 UXS1Q8NBZ7 420 aa16.21■□□□□ 0.19
CAPNS1-205ENST00000588780 NECAP1Q8NC96 275 aa16.21■□□□□ 0.19
CAPNS1-205ENST00000588780 OR1L6Q8NGR2 347 aa16.21■□□□□ 0.19
CAPNS1-205ENST00000588780 SRSF12Q8WXF0 261 aaKnown RBP16.21■□□□□ 0.19
CAPNS1-205ENST00000588780 PLEKHJ1Q9NW61 149 aa16.21■□□□□ 0.19
CAPNS1-205ENST00000588780 MLXQ9UH92 298 aa16.21■□□□□ 0.19
CAPNS1-205ENST00000588780 UBE2CO00762 179 aa16.2■□□□□ 0.18
CAPNS1-205ENST00000588780 ACTL6BO94805 426 aa16.2■□□□□ 0.18
CAPNS1-205ENST00000588780 NAPSAO96009 420 aa16.2■□□□□ 0.18
CAPNS1-205ENST00000588780 HLA-DRB3P79483 266 aa16.2■□□□□ 0.18
CAPNS1-205ENST00000588780 ZNF45Q02386 682 aa16.2■□□□□ 0.18
CAPNS1-205ENST00000588780 RTL8BQ17RB0 113 aa16.2■□□□□ 0.18
CAPNS1-205ENST00000588780 VMA21Q3ZAQ7 101 aa16.2■□□□□ 0.18
CAPNS1-205ENST00000588780 FAM106AQ4KMX7 169 aa16.2■□□□□ 0.18
CAPNS1-205ENST00000588780 ZNF880Q6PDB4 577 aa16.2■□□□□ 0.18
CAPNS1-205ENST00000588780 BTNL8Q6UX41 500 aa16.2■□□□□ 0.18
CAPNS1-205ENST00000588780 GHRLQ9UBU3 117 aa16.2■□□□□ 0.18
CAPNS1-205ENST00000588780 IGHV3-23P01764 117 aa16.19■□□□□ 0.18
CAPNS1-205ENST00000588780 MED14OSP0DP75 135 aa16.19■□□□□ 0.18
CAPNS1-205ENST00000588780 IDO2Q6ZQW0 420 aa16.19■□□□□ 0.18
CAPNS1-205ENST00000588780 SLC38A6Q8IZM9 456 aa16.19■□□□□ 0.18
CAPNS1-205ENST00000588780 NKAIN3Q8N8D7 197 aa16.19■□□□□ 0.18
CAPNS1-205ENST00000588780 RHOXF1Q8NHV9 184 aa16.19■□□□□ 0.18
CAPNS1-205ENST00000588780 PTX4Q96A99 478 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms