RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 OR2AK2Q8NG84 335 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 OR10V1Q8NGI7 309 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 CASTOR1Q8WTX7 329 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 MALSU1Q96EH3 234 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 DUX5Q96PT3 197 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 MEGF9Q9H1U4 602 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 RANGRFQ9HD47 186 aaPredicted RBP16.3■□□□□ 0.2
ATG4D-208ENST00000588667 MGAT4CQ9UBM8 478 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 IGKV1D-13A0A0B4J2D9 117 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 CRYM-AS1A6NIL9 109 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 GPR31O00270 319 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 RNASE1P07998 156 aaKnown RBP16.29■□□□□ 0.2
ATG4D-208ENST00000588667 IGKV1-13P0DP09 117 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 ANXA3P12429 323 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 CXCL3P19876 107 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 HTR1DP28221 377 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 S100GP29377 79 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 GNRHRP30968 328 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 IER3P46695 156 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 PRRX1P54821 245 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 LOXL3P58215 753 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 HLA-DRB5Q30154 266 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 LDLRAD2Q5SZI1 272 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 CMTM1Q8IZ96 169 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 OR52L2PQ8NGH6 319 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 RTN4IP1Q8WWV3 396 aaPredicted RBP16.29■□□□□ 0.2
ATG4D-208ENST00000588667 TMEM158Q8WZ71 300 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 GFOD1Q9NXC2 390 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 JPT1Q9UK76 154 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 PSG11Q9UQ72 335 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 KCNIP3Q9Y2W7 256 aa16.29■□□□□ 0.2
ATG4D-208ENST00000588667 RBM7Q9Y580 266 aaKnown RBP16.29■□□□□ 0.2
ATG4D-208ENST00000588667 BOLA2-SMG1P6H3BVE0 249 aa16.28■□□□□ 0.2
ATG4D-208ENST00000588667 IGHV4-59P01825 116 aa16.28■□□□□ 0.2
ATG4D-208ENST00000588667 SUPT4H1P63272 117 aaKnown RBP16.28■□□□□ 0.2
ATG4D-208ENST00000588667 AANATQ16613 207 aa16.28■□□□□ 0.2
ATG4D-208ENST00000588667 KRTAP24-1Q3LI83 254 aa16.28■□□□□ 0.2
ATG4D-208ENST00000588667 PHLDA2Q53GA4 152 aa16.28■□□□□ 0.2
ATG4D-208ENST00000588667 TCTE3Q8IZS6 198 aa16.28■□□□□ 0.2
ATG4D-208ENST00000588667 COQ8AQ8NI60 647 aa16.28■□□□□ 0.2
ATG4D-208ENST00000588667 LEAP2Q969E1 77 aa16.28■□□□□ 0.2
ATG4D-208ENST00000588667 A0A0B4J2A0 478 aa16.27■□□□□ 0.2
ATG4D-208ENST00000588667 J3QR06 171 aa16.27■□□□□ 0.2
ATG4D-208ENST00000588667 RND3P61587 244 aa16.27■□□□□ 0.2
ATG4D-208ENST00000588667 SSX2Q16385 188 aa16.27■□□□□ 0.2
ATG4D-208ENST00000588667 Q3ZCU0 254 aa16.27■□□□□ 0.2
ATG4D-208ENST00000588667 FAM216AQ8WUB2 273 aa16.27■□□□□ 0.2
ATG4D-208ENST00000588667 NAA60Q9H7X0 242 aa16.27■□□□□ 0.2
ATG4D-208ENST00000588667 DPM3Q9P2X0 92 aa16.27■□□□□ 0.2
ATG4D-208ENST00000588667 GNG12Q9UBI6 72 aa16.27■□□□□ 0.2
ATG4D-208ENST00000588667 SHPKQ9UHJ6 478 aa16.27■□□□□ 0.2
ATG4D-208ENST00000588667 IGHV3-43A0A0B4J1X8 118 aa16.27■□□□□ 0.19
ATG4D-208ENST00000588667 BTBD17A6NE02 478 aa16.27■□□□□ 0.19
ATG4D-208ENST00000588667 BUB1B-PAK6H3BSN5 160 aa16.27■□□□□ 0.19
ATG4D-208ENST00000588667 SLC22A5O76082 557 aa16.27■□□□□ 0.19
ATG4D-208ENST00000588667 IGHV3-7P01780 117 aa16.27■□□□□ 0.19
ATG4D-208ENST00000588667 IGHV3-43DP0DP04 118 aa16.27■□□□□ 0.19
ATG4D-208ENST00000588667 GNG10P50151 68 aa16.27■□□□□ 0.19
ATG4D-208ENST00000588667 LRRC75BQ2VPJ9 315 aa16.27■□□□□ 0.19
ATG4D-208ENST00000588667 ZNF818PQ6ZRF7 136 aa16.27■□□□□ 0.19
ATG4D-208ENST00000588667 C8orf31Q8N9H6 132 aa16.27■□□□□ 0.19
ATG4D-208ENST00000588667 OR5R1Q8NH85 324 aa16.27■□□□□ 0.19
ATG4D-208ENST00000588667 FYTTD1Q96QD9 318 aaKnown RBP16.27■□□□□ 0.19
ATG4D-208ENST00000588667 ZNF436Q9C0F3 470 aaPredicted RBP16.27■□□□□ 0.19
ATG4D-208ENST00000588667 CCL28Q9NRJ3 127 aa16.27■□□□□ 0.19
ATG4D-208ENST00000588667 AMMECR1Q9Y4X0 333 aaPredicted RBP16.27■□□□□ 0.19
ATG4D-208ENST00000588667 LEUTXA8MZ59 168 aa16.26■□□□□ 0.19
ATG4D-208ENST00000588667 HSD17B6O14756 317 aa16.26■□□□□ 0.19
ATG4D-208ENST00000588667 RGS11O94810 467 aa16.26■□□□□ 0.19
ATG4D-208ENST00000588667 CEACAM3P40198 252 aa16.26■□□□□ 0.19
ATG4D-208ENST00000588667 GNMTQ14749 295 aa16.26■□□□□ 0.19
ATG4D-208ENST00000588667 LIN54Q6MZP7 749 aa16.26■□□□□ 0.19
ATG4D-208ENST00000588667 DYNAPQ8N1N2 210 aa16.26■□□□□ 0.19
ATG4D-208ENST00000588667 EDARADDQ8WWZ3 215 aa16.26■□□□□ 0.19
ATG4D-208ENST00000588667 GALNT14Q96FL9 552 aa16.26■□□□□ 0.19
ATG4D-208ENST00000588667 AKR1E2Q96JD6 320 aa16.26■□□□□ 0.19
ATG4D-208ENST00000588667 SSX3Q99909 188 aa16.26■□□□□ 0.19
ATG4D-208ENST00000588667 CHIAQ9BZP6 476 aa16.26■□□□□ 0.19
ATG4D-208ENST00000588667 RNF212BA8MTL3 300 aa16.25■□□□□ 0.19
ATG4D-208ENST00000588667 GOSR2O14653 212 aa16.25■□□□□ 0.19
ATG4D-208ENST00000588667 MPPED1O15442 326 aa16.25■□□□□ 0.19
ATG4D-208ENST00000588667 OR8U9P0C7N5 309 aa16.25■□□□□ 0.19
ATG4D-208ENST00000588667 PAX6P26367 422 aa16.25■□□□□ 0.19
ATG4D-208ENST00000588667 PPP1CCP36873 323 aaKnown RBP16.25■□□□□ 0.19
ATG4D-208ENST00000588667 KCTD9Q7L273 389 aa16.25■□□□□ 0.19
ATG4D-208ENST00000588667 LINC00311Q8N616 119 aa16.25■□□□□ 0.19
ATG4D-208ENST00000588667 BVESQ8NE79 360 aa16.25■□□□□ 0.19
ATG4D-208ENST00000588667 OR8U1Q8NH10 309 aa16.25■□□□□ 0.19
ATG4D-208ENST00000588667 TNFRSF19Q9NS68 423 aa16.25■□□□□ 0.19
ATG4D-208ENST00000588667 HILPDAQ9Y5L2 63 aa16.25■□□□□ 0.19
ATG4D-208ENST00000588667 YPEL1O60688 119 aa16.24■□□□□ 0.19
ATG4D-208ENST00000588667 ZFP69Q49AA0 526 aa16.24■□□□□ 0.19
ATG4D-208ENST00000588667 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.24■□□□□ 0.19
ATG4D-208ENST00000588667 OR10X1Q8NGY0 326 aa16.24■□□□□ 0.19
ATG4D-208ENST00000588667 ASB13Q8WXK3 278 aa16.24■□□□□ 0.19
ATG4D-208ENST00000588667 YPEL2Q96QA6 119 aa16.24■□□□□ 0.19
ATG4D-208ENST00000588667 PARP12Q9H0J9 701 aaKnown RBP16.24■□□□□ 0.19
ATG4D-208ENST00000588667 VPREB3Q9UKI3 123 aa16.24■□□□□ 0.19
ATG4D-208ENST00000588667 LY6LH3BQJ8 138 aa16.23■□□□□ 0.19
ATG4D-208ENST00000588667 H3BUX3 64 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms