RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 LRP11Q86VZ4 500 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 LRRC25Q8N386 305 aaPredicted RBP4.52□□□□□ -1.69
VMP1-208ENST00000588617 C3orf22Q8N5N4 141 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 ZNF615Q8N8J6 731 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 OR1L8Q8NGR8 309 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 SCRT1Q9BWW7 348 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 GLTPQ9NZD2 209 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 SLC23A2Q9UGH3 650 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 CARHSP1Q9Y2V2 147 aaKnown RBP4.52□□□□□ -1.69
VMP1-208ENST00000588617 ARL2BPQ9Y2Y0 163 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 ABCA8O94911 1581 aa4.52□□□□□ -1.69
VMP1-208ENST00000588617 TCOF1Q13428 1488 aaKnown RBP4.51□□□□□ -1.69
VMP1-208ENST00000588617 TRBV24-1A0A075B6N3 115 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 TMED7-TICAM2A0A0A6YYA0 188 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 DISC1C4P0D8 188 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 DENRO43583 198 aaKnown RBP4.51□□□□□ -1.69
VMP1-208ENST00000588617 GSTZ1O43708 216 aaPredicted RBP4.51□□□□□ -1.69
VMP1-208ENST00000588617 SH2D1AO60880 128 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 OR5F1O95221 314 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 MT-CO2P00403 227 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 PFN1P07737 140 aaKnown RBP4.51□□□□□ -1.69
VMP1-208ENST00000588617 ARF6P62330 175 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 FAM173BQ6P4H8 233 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 CCDC121Q6ZUS5 278 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 CALHM3Q86XJ0 350 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 C1orf174Q8IYL3 243 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 ZNF721Q8TF20 911 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 MS4A6EQ96DS6 147 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 RMI2Q96E14 147 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 SLC25A44Q96H78 314 aaPredicted RBP4.51□□□□□ -1.69
VMP1-208ENST00000588617 C9orf16Q9BUW7 83 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 LINC00588Q9Y4M8 146 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 U3KQK5 164 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 PTPRGP23470 1445 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 TROQ12816 1431 aaPredicted RBP4.51□□□□□ -1.69
VMP1-208ENST00000588617 PRG4Q92954 1404 aaPredicted RBP4.51□□□□□ -1.69
VMP1-208ENST00000588617 ADGRL3Q9HAR2 1447 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 SUPT6HQ7KZ85 1726 aaKnown RBP4.51□□□□□ -1.69
VMP1-208ENST00000588617 NUP205Q92621 2012 aa4.51□□□□□ -1.69
VMP1-208ENST00000588617 UHRF1BP1LA0JNW5 1464 aa4.5□□□□□ -1.69
VMP1-208ENST00000588617 SERPINA1P01009 418 aa4.5□□□□□ -1.69
VMP1-208ENST00000588617 HLA-DQB2P05538 268 aa4.5□□□□□ -1.69
VMP1-208ENST00000588617 OR5G3P0C626 314 aa4.5□□□□□ -1.69
VMP1-208ENST00000588617 OPRM1P35372 400 aa4.5□□□□□ -1.69
VMP1-208ENST00000588617 C10orf91Q5T1B1 145 aa4.5□□□□□ -1.69
VMP1-208ENST00000588617 BPIFB6Q8NFQ5 453 aa4.5□□□□□ -1.69
VMP1-208ENST00000588617 TBX5Q99593 518 aa4.5□□□□□ -1.69
VMP1-208ENST00000588617 TLNRD1Q9H1K6 362 aa4.5□□□□□ -1.69
VMP1-208ENST00000588617 OR5V1Q9UGF6 321 aa4.5□□□□□ -1.69
VMP1-208ENST00000588617 UACAQ9BZF9 1416 aa4.49□□□□□ -1.69
VMP1-208ENST00000588617 CNIH1O95406 144 aa4.49□□□□□ -1.69
VMP1-208ENST00000588617 CD79AP11912 226 aa4.49□□□□□ -1.69
VMP1-208ENST00000588617 CCL1P22362 96 aa4.49□□□□□ -1.69
VMP1-208ENST00000588617 KLF3P57682 345 aaPredicted RBP4.49□□□□□ -1.69
VMP1-208ENST00000588617 MOBPQ13875 183 aa4.49□□□□□ -1.69
VMP1-208ENST00000588617 SPINT4Q6UDR6 99 aa4.49□□□□□ -1.69
VMP1-208ENST00000588617 Q6ZQT7 251 aa4.49□□□□□ -1.69
VMP1-208ENST00000588617 DEFB125Q8N687 156 aa4.49□□□□□ -1.69
VMP1-208ENST00000588617 OR2T27Q8NH04 317 aa4.49□□□□□ -1.69
VMP1-208ENST00000588617 PXMP4Q9Y6I8 212 aa4.49□□□□□ -1.69
VMP1-208ENST00000588617 MAGI3Q5TCQ9 1506 aa4.49□□□□□ -1.69
VMP1-208ENST00000588617 ADCY10Q96PN6 1610 aa4.49□□□□□ -1.69
VMP1-208ENST00000588617 HFM1A2PYH4 1435 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 ABCC2Q92887 1545 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 EEF1E1-BLOC1S5C9J1V9 151 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 LECT2O14960 151 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 SLC25A20O43772 301 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 CD7P09564 240 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 FAM228BP0C875 321 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 AKR1C2P52895 323 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 FGF12P61328 243 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 BIKQ13323 160 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 PMAIP1Q13794 54 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 OR8G1Q15617 311 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 FAM201AQ5SY85 155 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 C5orf46Q6UWT4 87 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 LYZL2Q7Z4W2 148 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 S100A7AQ86SG5 101 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 C1orf158Q8N1D5 194 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 RPRMLQ8N4K4 120 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 PHOSPHO2Q8TCD6 241 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 ANAPC10Q9UM13 185 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 ROCK1Q13464 1354 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 ATP10BO94823 1461 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 THSD7AQ9UPZ6 1657 aa4.48□□□□□ -1.69
VMP1-208ENST00000588617 THADAQ6YHU6 1953 aa4.47□□□□□ -1.69
VMP1-208ENST00000588617 SETD5Q9C0A6 1442 aa4.47□□□□□ -1.69
VMP1-208ENST00000588617 CDK13Q14004 1512 aaKnown RBP4.47□□□□□ -1.69
VMP1-208ENST00000588617 KDM5BQ9UGL1 1544 aa4.47□□□□□ -1.69
VMP1-208ENST00000588617 CHD1O14646 1710 aa4.47□□□□□ -1.69
VMP1-208ENST00000588617 LINC00315P59091 139 aa4.47□□□□□ -1.69
VMP1-208ENST00000588617 BTN3A2P78410 334 aa4.47□□□□□ -1.69
VMP1-208ENST00000588617 LGALSLQ3ZCW2 172 aaPredicted RBP4.47□□□□□ -1.69
VMP1-208ENST00000588617 OR6V1Q8N148 313 aa4.47□□□□□ -1.69
VMP1-208ENST00000588617 FAM96AQ9H5X1 160 aa4.47□□□□□ -1.69
VMP1-208ENST00000588617 FBXO5Q9UKT4 447 aa4.47□□□□□ -1.69
VMP1-208ENST00000588617 ZBED9Q6R2W3 1325 aa4.46□□□□□ -1.69
VMP1-208ENST00000588617 KIF14Q15058 1648 aa4.46□□□□□ -1.69
VMP1-208ENST00000588617 LRRIQ1Q96JM4 1722 aa4.46□□□□□ -1.69
VMP1-208ENST00000588617 PRRC2AP48634 2157 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms